| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338191
Identifier: 158338191
GI number: 158338191
Start: 5137741
End: 5138736
Strand: Direct
Name: 158338191
Synonym: AM1_5084
Alternate gene names: NA
Gene position: 5137741-5138736 (Clockwise)
Preceding gene: 158338190
Following gene: 158338192
Centisome position: 79.0
GC content: 49.3
Gene sequence:
>996_bases ATGACTGTATCAACTAACTCAACCCTCACCCCGTTTGCCCAAAAGCTGGTTGCCCCCCTGACGAAGCAGACAATTTCAGT GCTGCAAATTAATTTAGGGCGACGGTGCAACTTAGCCTGTAGCCACTGCCATGTCGAGGCTAGCCCTAAGCGGACAGAAG AGCTATCCCCAGAGATCTGTGAGCAGTTGGTTGAATTGATTCATCGATTCCCTCAGATTGAAACCGTAGACTTAACGGGG GGTGCCCCGGAGATGAATTACGGCTTTCGTCCCCTAGTAGAGGCGGCTCGCTCCCACAACAAAGAAGTCATTGTCCGTTC AAATTTAACCATTTACTTTGAGCCGGGTTTTGAAGATTTACCGGACTATTTTGCTCAGCATCAACTACGAGTGGTGGCTT CCTTGCCCTGTTATCTGGAGCAAAATGTAGACAAAATGCGGGGTGATGGCGTTTTTGACAACTCAATCAAAGCGCTGCAG CGGTTGAATCAGTTGGGCTATGGCTCCGATTCGAACTTAACGCTGAACCTAGTGTATAACCCTCAGGTGCCGACTACCCT GGACTTTGCCCTAGCGCCAGATCAGCAGCCCTTAGAACTGGCCTATAAACAACATTTAGGGGAGCAGTTTGGGATTACGT TTAACCATCTGTTTGCGATTACCAATCTCCCCATCGGCCGCACCAAGTTTCATCTGGAACACCGTCAGCTTCATCAGCCC TATCTGCAGTTTTTGGAAGGTCACTTTAATGACTCGACCGTTGAGCATTTAATGTGCCGCAATGAGCTATCCGTGGACTA TCTGGGCAATATCTATGACTGCGATTTTAACCAAATGGAAGAGATCCCTGCCACGACCCCTAAGGGGGAACGATTAACGG TGAAGAAGCTATTGGATGCTGGCAGTCTCGATGTAATTGAGGACGTGAAAACAGCGCCCTATTGCTATGGCTGCACCGCT GGGAGTGGTTCGAGCTGCGGCGGTTCTTTGTTATGA
Upstream 100 bases:
>100_bases AGCCCATCCCCAAGCAATTATGATCACCGACTCAACTTGGTACTACGACGGTGGAGGATGTTGCTAAACGACGCCGTTTG TTGTTGTGGATCGAGCTGTT
Downstream 100 bases:
>100_bases CATCACACACATTTTTAAAGGTAAATCTATGAATCTTCGTCGCTGGAAAAAAATTCAACCGATATTATTGGCCGCCTTTG CCTTTTTGGTGATTACGGCT
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTVSTNSTLTPFAQKLVAPLTKQTISVLQINLGRRCNLACSHCHVEASPKRTEELSPEICEQLVELIHRFPQIETVDLTG GAPEMNYGFRPLVEAARSHNKEVIVRSNLTIYFEPGFEDLPDYFAQHQLRVVASLPCYLEQNVDKMRGDGVFDNSIKALQ RLNQLGYGSDSNLTLNLVYNPQVPTTLDFALAPDQQPLELAYKQHLGEQFGITFNHLFAITNLPIGRTKFHLEHRQLHQP YLQFLEGHFNDSTVEHLMCRNELSVDYLGNIYDCDFNQMEEIPATTPKGERLTVKKLLDAGSLDVIEDVKTAPYCYGCTA GSGSSCGGSLL
Sequences:
>Translated_331_residues MTVSTNSTLTPFAQKLVAPLTKQTISVLQINLGRRCNLACSHCHVEASPKRTEELSPEICEQLVELIHRFPQIETVDLTG GAPEMNYGFRPLVEAARSHNKEVIVRSNLTIYFEPGFEDLPDYFAQHQLRVVASLPCYLEQNVDKMRGDGVFDNSIKALQ RLNQLGYGSDSNLTLNLVYNPQVPTTLDFALAPDQQPLELAYKQHLGEQFGITFNHLFAITNLPIGRTKFHLEHRQLHQP YLQFLEGHFNDSTVEHLMCRNELSVDYLGNIYDCDFNQMEEIPATTPKGERLTVKKLLDAGSLDVIEDVKTAPYCYGCTA GSGSSCGGSLL >Mature_330_residues TVSTNSTLTPFAQKLVAPLTKQTISVLQINLGRRCNLACSHCHVEASPKRTEELSPEICEQLVELIHRFPQIETVDLTGG APEMNYGFRPLVEAARSHNKEVIVRSNLTIYFEPGFEDLPDYFAQHQLRVVASLPCYLEQNVDKMRGDGVFDNSIKALQR LNQLGYGSDSNLTLNLVYNPQVPTTLDFALAPDQQPLELAYKQHLGEQFGITFNHLFAITNLPIGRTKFHLEHRQLHQPY LQFLEGHFNDSTVEHLMCRNELSVDYLGNIYDCDFNQMEEIPATTPKGERLTVKKLLDAGSLDVIEDVKTAPYCYGCTAG SGSSCGGSLL
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37063; Mature: 36931
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSTNSTLTPFAQKLVAPLTKQTISVLQINLGRRCNLACSHCHVEASPKRTEELSPEIC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCHHHH EQLVELIHRFPQIETVDLTGGAPEMNYGFRPLVEAARSHNKEVIVRSNLTIYFEPGFEDL HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEECCCCHHH PDYFAQHQLRVVASLPCYLEQNVDKMRGDGVFDNSIKALQRLNQLGYGSDSNLTLNLVYN HHHHHHHHHHHHHHCCHHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC PQVPTTLDFALAPDQQPLELAYKQHLGEQFGITFNHLFAITNLPIGRTKFHLEHRQLHQP CCCCCEEEEEECCCCCHHHHHHHHHCCHHHCCHHHHHEEECCCCCCCCEEEHHHHHHHHH YLQFLEGHFNDSTVEHLMCRNELSVDYLGNIYDCDFNQMEEIPATTPKGERLTVKKLLDA HHHHHHCCCCHHHHHHHHHHCCCCHHHCCCEEECCHHHHHHCCCCCCCCCEEEHHHHHCC GSLDVIEDVKTAPYCYGCTAGSGSSCGGSLL CCCHHHHHHCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure TVSTNSTLTPFAQKLVAPLTKQTISVLQINLGRRCNLACSHCHVEASPKRTEELSPEIC CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCHHHH EQLVELIHRFPQIETVDLTGGAPEMNYGFRPLVEAARSHNKEVIVRSNLTIYFEPGFEDL HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEECCCCHHH PDYFAQHQLRVVASLPCYLEQNVDKMRGDGVFDNSIKALQRLNQLGYGSDSNLTLNLVYN HHHHHHHHHHHHHHCCHHHHHCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC PQVPTTLDFALAPDQQPLELAYKQHLGEQFGITFNHLFAITNLPIGRTKFHLEHRQLHQP CCCCCEEEEEECCCCCHHHHHHHHHCCHHHCCHHHHHEEECCCCCCCCEEEHHHHHHHHH YLQFLEGHFNDSTVEHLMCRNELSVDYLGNIYDCDFNQMEEIPATTPKGERLTVKKLLDA HHHHHHCCCCHHHHHHHHHHCCCCHHHCCCEEECCHHHHHHCCCCCCCCCEEEHHHHHCC GSLDVIEDVKTAPYCYGCTAGSGSSCGGSLL CCCHHHHHHCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA