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The map label for this gene is rcp1 [H]

Identifier: 158338164

GI number: 158338164

Start: 5102326

End: 5102757

Strand: Direct

Name: rcp1 [H]

Synonym: AM1_5056

Alternate gene names: 158338164

Gene position: 5102326-5102757 (Clockwise)

Preceding gene: 158338163

Following gene: 158338165

Centisome position: 78.45

GC content: 47.92

Gene sequence:

>432_bases
ATGAATGACAAAGCAATCAACATTTTGCTCGTAGAAGATGACGAAGTAGACGTGATGAACGTCAAGCGGGCTTTCAAAAA
AGGCATGATTACAAATCCCTTGTATGTCGCCAATAATGGCCTGGAAGCCTTGTCCATGTTGCGAGGAGAAGCGGGGGAGA
AACCGCCCGTACCGAAGCATCGCCGTCTGATTCTGTTGGATCTCAATATGCCCAAAATGAATGGGTTGGAATTTCTAGAA
GTCTTGCGCAGCGATCCGGATCTGCAATCGATTCCGGTGGTGGTATTGACCACCTCCGATGAAGATCGCGATCGCATCGA
GGCATACCACTACAATGTGGCCGGTTATATCCTGAAACCCGTAACGTTTTCCAACTTTGCAGAGGTGATGACCACCCTCA
ATAAATACTGGACCCTTTGCGAAATGCTGTAG

Upstream 100 bases:

>100_bases
AGAGGTAAAATCGAGCAACGGTCCGATAGTCTGGAAGAGTCTCACTTAAAAATAGGTCTGTTAAAACTAAATACAACGTA
CAGGGTGGCTTGAGAAGGAG

Downstream 100 bases:

>100_bases
TGGGATTGATGGACGAGACGCTCAAACTCCTAGTGATTGATGATGATGAAGTCGATCGGATGGCCGTTCGGCGGGCCTTA
GGCAAAACCAATTTAGAGGT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNDKAINILLVEDDEVDVMNVKRAFKKGMITNPLYVANNGLEALSMLRGEAGEKPPVPKHRRLILLDLNMPKMNGLEFLE
VLRSDPDLQSIPVVVLTTSDEDRDRIEAYHYNVAGYILKPVTFSNFAEVMTTLNKYWTLCEML

Sequences:

>Translated_143_residues
MNDKAINILLVEDDEVDVMNVKRAFKKGMITNPLYVANNGLEALSMLRGEAGEKPPVPKHRRLILLDLNMPKMNGLEFLE
VLRSDPDLQSIPVVVLTTSDEDRDRIEAYHYNVAGYILKPVTFSNFAEVMTTLNKYWTLCEML
>Mature_143_residues
MNDKAINILLVEDDEVDVMNVKRAFKKGMITNPLYVANNGLEALSMLRGEAGEKPPVPKHRRLILLDLNMPKMNGLEFLE
VLRSDPDLQSIPVVVLTTSDEDRDRIEAYHYNVAGYILKPVTFSNFAEVMTTLNKYWTLCEML

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788191, Length=137, Percent_Identity=30.6569343065693, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 16299; Mature: 16299

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKAINILLVEDDEVDVMNVKRAFKKGMITNPLYVANNGLEALSMLRGEAGEKPPVPKH
CCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCC
RRLILLDLNMPKMNGLEFLEVLRSDPDLQSIPVVVLTTSDEDRDRIEAYHYNVAGYILKP
CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHEEECEEEEEECC
VTFSNFAEVMTTLNKYWTLCEML
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDKAINILLVEDDEVDVMNVKRAFKKGMITNPLYVANNGLEALSMLRGEAGEKPPVPKH
CCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCC
RRLILLDLNMPKMNGLEFLEVLRSDPDLQSIPVVVLTTSDEDRDRIEAYHYNVAGYILKP
CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHEEECEEEEEECC
VTFSNFAEVMTTLNKYWTLCEML
CCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]