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The map label for this gene is ydhD [C]

Identifier: 158338006

GI number: 158338006

Start: 4942205

End: 4942528

Strand: Reverse

Name: ydhD [C]

Synonym: AM1_4893

Alternate gene names: 158338006

Gene position: 4942528-4942205 (Counterclockwise)

Preceding gene: 158338007

Following gene: 158338004

Centisome position: 76.0

GC content: 42.9

Gene sequence:

>324_bases
ATGACACCTGAATTGAAAGAACGCCTGGATAGCTTAGTTCAAACCAACAAAATCCTTGTGTTTATGAAAGGCTCTAAGCT
GATGCCTCAATGTGGATTTTCCAACAACGCGGTTCAGATTCTCAATAGCCTTGGCGTTCCTTACGAAACAGTAGATGTTT
TAGAAGACTACGATATTCGTCAAGGTATTAAAGAGTATTCCAACTGGCCCACTATTCCCCAAGTCTATATCAATGGGGAA
TTTGTAGGGGGTTCCGATGTCTTGATCGAACTATATCAGCAGGGTGAGTTGCAGCAGTTGGTCGAGGTTGCTCTAGCTTC
GTAA

Upstream 100 bases:

>100_bases
AAAGTGGCAGACCCAACAAGCCGATGTGGTGCAGCCTTCCTAAAGGCGAACCCACCTCAATGATTAACCTCCTGATTAGA
CGTATTTTTTGGATCCTGTT

Downstream 100 bases:

>100_bases
ATCATGTCCTCATGATTTTCCAGGTACGGGCTTTTCAGTCATTAAAATGACTTAGCTCATGGATGGGAAATCATCAAGAT
AGTCACTGACATCTGCATCT

Product: glutaredoxin related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTPELKERLDSLVQTNKILVFMKGSKLMPQCGFSNNAVQILNSLGVPYETVDVLEDYDIRQGIKEYSNWPTIPQVYINGE
FVGGSDVLIELYQQGELQQLVEVALAS

Sequences:

>Translated_107_residues
MTPELKERLDSLVQTNKILVFMKGSKLMPQCGFSNNAVQILNSLGVPYETVDVLEDYDIRQGIKEYSNWPTIPQVYINGE
FVGGSDVLIELYQQGELQQLVEVALAS
>Mature_106_residues
TPELKERLDSLVQTNKILVFMKGSKLMPQCGFSNNAVQILNSLGVPYETVDVLEDYDIRQGIKEYSNWPTIPQVYINGEF
VGGSDVLIELYQQGELQQLVEVALAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=59.7826086956522, Blast_Score=122, Evalue=8e-29,
Organism=Homo sapiens, GI95113651, Length=96, Percent_Identity=54.1666666666667, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787943, Length=100, Percent_Identity=48, Blast_Score=112, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=43.4343434343434, Blast_Score=107, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71988153, Length=86, Percent_Identity=50, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71988159, Length=101, Percent_Identity=45.5445544554455, Blast_Score=102, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=109, Percent_Identity=40.3669724770642, Blast_Score=102, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=48.1927710843374, Blast_Score=92, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6320303, Length=87, Percent_Identity=45.9770114942529, Blast_Score=89, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24642023, Length=92, Percent_Identity=56.5217391304348, Blast_Score=125, Evalue=5e-30,
Organism=Drosophila melanogaster, GI19921242, Length=98, Percent_Identity=46.9387755102041, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12010; Mature: 11879

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELKERLDSLVQTNKILVFMKGSKLMPQCGFSNNAVQILNSLGVPYETVDVLEDYDIR
CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHH
QGIKEYSNWPTIPQVYINGEFVGGSDVLIELYQQGELQQLVEVALAS
HHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
TPELKERLDSLVQTNKILVFMKGSKLMPQCGFSNNAVQILNSLGVPYETVDVLEDYDIR
CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHH
QGIKEYSNWPTIPQVYINGEFVGGSDVLIELYQQGELQQLVEVALAS
HHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]