| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158337919
Identifier: 158337919
GI number: 158337919
Start: 4844095
End: 4844649
Strand: Direct
Name: 158337919
Synonym: AM1_4806
Alternate gene names: NA
Gene position: 4844095-4844649 (Clockwise)
Preceding gene: 158337916
Following gene: 158337920
Centisome position: 74.48
GC content: 38.92
Gene sequence:
>555_bases ATGCCCATTGTTAATAAAGCAGCTCCATTAATTATTGAGATTCCCAATATTTTGACATTCAAAGAATGTGATGAATTAAT GGGGAAGATCAATCAGCTTAACCCTAGTCTGGCAACGGTTCGTAATGATGGAGAGGCCGAGATTAATACCAATGTACGCA ATAATGAGCGAGTTGTTTTCAGCGATTTCTCCCTTGCAGAGAAATTATTTTTAAAGGCACAAGAGTACGTCCCGCCAACA ATGCAGGGAAGAATCTTGTTGAGCGCTAATGAACGCTTTAGATGCTATCGATATAAAGTTGGCATGAAATTTAGCCCTCA TTATGATGGCTCACTTGAACGGAATGGAAATGAAAAGAGTTATTACTCATTTCTGGTCTACTTAAACGATGATTTTGAAG GTGGACAAACAAATTTCCTAACCGAGTCAATATGCTCAATTACGCCTCGAAAGGGTTTTGGTCTTTTGTTTCAGCATCTC ATCCTTCATGAGGGGGTTGAGGTATCTAGAGGTGTGAAATATGTAGCAAGAACAGACTTAATGTATCAGAGGTAA
Upstream 100 bases:
>100_bases CTTGGATTCTGTGATGCAGGCAGGCTGATAGATTTACGCTCTCAAGCAATTGTTTGAGCCCTTATGACTGGTATATTCGT TCGCTTTGTAATTAATACTG
Downstream 100 bases:
>100_bases ACAGCATGGGGAACGTGGGAAAAGCTCAAGACATCGCAGTGCTATCTGGGTAAAACTAGGGGCATCACTATCTCTTCTAG ACGGTTGAGGACAAGTCATA
Product: 2OG-Fe(II) oxygenase family oxidoreductase
Products: NA
Alternate protein names: WD-40 Repeat-Containing Protein; Prolyl 4-Hydroxylase Alpha Subunit; Iron-Regulated Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPIVNKAAPLIIEIPNILTFKECDELMGKINQLNPSLATVRNDGEAEINTNVRNNERVVFSDFSLAEKLFLKAQEYVPPT MQGRILLSANERFRCYRYKVGMKFSPHYDGSLERNGNEKSYYSFLVYLNDDFEGGQTNFLTESICSITPRKGFGLLFQHL ILHEGVEVSRGVKYVARTDLMYQR
Sequences:
>Translated_184_residues MPIVNKAAPLIIEIPNILTFKECDELMGKINQLNPSLATVRNDGEAEINTNVRNNERVVFSDFSLAEKLFLKAQEYVPPT MQGRILLSANERFRCYRYKVGMKFSPHYDGSLERNGNEKSYYSFLVYLNDDFEGGQTNFLTESICSITPRKGFGLLFQHL ILHEGVEVSRGVKYVARTDLMYQR >Mature_183_residues PIVNKAAPLIIEIPNILTFKECDELMGKINQLNPSLATVRNDGEAEINTNVRNNERVVFSDFSLAEKLFLKAQEYVPPTM QGRILLSANERFRCYRYKVGMKFSPHYDGSLERNGNEKSYYSFLVYLNDDFEGGQTNFLTESICSITPRKGFGLLFQHLI LHEGVEVSRGVKYVARTDLMYQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21128; Mature: 20997
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVNKAAPLIIEIPNILTFKECDELMGKINQLNPSLATVRNDGEAEINTNVRNNERVVF CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCEEEE SDFSLAEKLFLKAQEYVPPTMQGRILLSANERFRCYRYKVGMKFSPHYDGSLERNGNEKS ECHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCEECCCCCCCCCCCCCCCE YYSFLVYLNDDFEGGQTNFLTESICSITPRKGFGLLFQHLILHEGVEVSRGVKYVARTDL EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCHHHHHHHCH MYQR HCCC >Mature Secondary Structure PIVNKAAPLIIEIPNILTFKECDELMGKINQLNPSLATVRNDGEAEINTNVRNNERVVF CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCCEEEE SDFSLAEKLFLKAQEYVPPTMQGRILLSANERFRCYRYKVGMKFSPHYDGSLERNGNEKS ECHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECCEECCCCCCCCCCCCCCCE YYSFLVYLNDDFEGGQTNFLTESICSITPRKGFGLLFQHLILHEGVEVSRGVKYVARTDL EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHCHHHHHHHCH MYQR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA