Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337872

Identifier: 158337872

GI number: 158337872

Start: 4799953

End: 4800684

Strand: Direct

Name: 158337872

Synonym: AM1_4758

Alternate gene names: NA

Gene position: 4799953-4800684 (Clockwise)

Preceding gene: 158337869

Following gene: 158337873

Centisome position: 73.8

GC content: 43.31

Gene sequence:

>732_bases
GTGAGTAATACAAGTAATTTTCGTAACGCTATTCAAGAGGCCAGACAGAACGCCCTTGTTGGCCCCAATGTTATTCCAAA
TGCTCTACCTTACCTAGGTGCAGGCTTAGTTTTAACTGCTGTCGGCGCATGGGGTGGTCTAGGAGTTATTTCTAGCTTTG
GCCCCCAAACTTACAGGGCCACTAGTCTGCCAGCGATGATTCTGTTCTTTGTACTCTTCTTCGTGTCACAAAGAGCAGCC
ACTAAAGTCAATAACAACGTTGCTTTGCCCCTGTTGGCAACATTCAGCTTAGTTACTGGCTATACCCTATCCTTGCTTGT
TGACATCGCTCTAAAAACATCCGGAGTAGGTGAAACGGGGTTAGCGATTGCTGCATTGAGTTGTGGCATTACCTTTATTG
CCGCTCGTCCTATTGGAGCAAATCTATCAGATGAAGATGGATTTGCCCTCACCAAAACAATTCAACTAGGGGTGATCGCT
TTACTAGTTGTCATGTTTGCCCAAGTCATATGTATGTGGTTTGGCATTATTTCTCCTAGCTGGTTGGAAATTGGGATTTC
CGGCATTGGCGTACTGTTGTTTGTTGGAGCAGCTGTTGTTGACTTCTTTGTTCTGCCTAGAACTTATGAAGATGAGCAAT
ATTTATCTGCTGCTCTATCCATGTACTTGACCTACGTCAATCTGTTTATCTTTATCCTCAGATTCTTAATCGCAATTAAT
AGTAGAGATTAA

Upstream 100 bases:

>100_bases
TACGGATAACCCTAAATTTGTTCCTCCCTACTAAAGAGGGAGATAAGGCAAAATGAGAGGTAGCAGACCAGTCAAAGAGT
TTGTTTAAAAGAGGAAGTCC

Downstream 100 bases:

>100_bases
CGATTGCAGCCGCTAGTGCTTTAGTTTCAGGGGGTTGGATAATTATCCAACCCCCTGAAACTTTTAAATTTCGAACAGAG
TCTTTATAAATGAATAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRATSLPAMILFFVLFFVSQRAA
TKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETGLAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIA
LLVVMFAQVICMWFGIISPSWLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN
SRD

Sequences:

>Translated_243_residues
MSNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRATSLPAMILFFVLFFVSQRAA
TKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETGLAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIA
LLVVMFAQVICMWFGIISPSWLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN
SRD
>Mature_242_residues
SNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRATSLPAMILFFVLFFVSQRAAT
KVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETGLAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIAL
LVVMFAQVICMWFGIISPSWLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAINS
RD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25913; Mature: 25782

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure 
SNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRA
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TSLPAMILFFVLFFVSQRAATKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETG
HCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIALLVVMFAQVICMWFGIISPS
HHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA