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The map label for this gene is recO

Identifier: 158337750

GI number: 158337750

Start: 4667094

End: 4667975

Strand: Direct

Name: recO

Synonym: AM1_4634

Alternate gene names: 158337750

Gene position: 4667094-4667975 (Clockwise)

Preceding gene: 158337749

Following gene: 158337751

Centisome position: 71.76

GC content: 54.65

Gene sequence:

>882_bases
ATGAGTCGAACCTACAAAGCGACAGGAATTAATCTCAAAAGTATGCCCTTCGGAGAGGCCGATCGCCTGCTGACGATCTT
GACCCGCGAGCAGGGGCTGGTCAGAGCTGTTGCCCCTGGATGCCGGAAGCCAAAGTCCAAGTTAGGCGGCCGTAGTGCTC
TGTTTGTGGTGAATGACTTGATGCTAGTACAGGGTCGGTCCCTGGATAAAATTGCCCAGGCCGAAACCTTAGAATCCTAT
CCCGGTTTAAGTCAAAATTTAGCTAAGTTGACTACCAGTCAATACCTTGCAGAGCTGACCCTTTATCAAGCCCTAAGCGG
CCAACCCCAGACAGAGCTGTGGGATTTATTTTGTCAACAGCTTACTCAACTTCAAAACGCGACCCTGGCCCAAGTCCCTT
GTTGTTTAATCCACGGCACCTTGAAATTATTGGCCGGGGCGGGCATTGCTCCCCAGGTTCATGCCTGCTGCGTCACCCAC
CAGCCTTTGGACCCGCCCACCAGCAACCCGACCTGGCGTGTGGGTTTCAGTGCGGGGGCAGGTGGTACTGTGACCCTCAC
AGGTCCCCCTCGACCACGCACCGCGATTCAGCAGGCAGCAGAACAAGCAATTGCCTATCCCCTGGGGGCAGATTATCGGG
TGCAAGGCAAATTATCTGCCCAGGAACTCGCATTACTGCAAGATCTCAACCCTGCGGAGATTCAGCCTGCTTCCCCCTTA
CCATTGCCGTTAATCGCAACCTATCCGTTGGTGATCTGGCAAGGGGTGGAGTCTGCTCTACGTCACTATGCCGAAGCCTA
TTTTGATCGCCCGATTCGATCCGCTGCCCTGATTGACACCTGTTTTACCCCCCTGCCCGACCTCACTTCCGTGCCTTCAT
GA

Upstream 100 bases:

>100_bases
TTCTCGAAATATCCACCTCAAGATGTTTGGATCAAGGCAAGCGGGTGTCCACGCTATCCTGCTTCCCCCAACTCGGTTTT
CTCGATCCAGGTAGACCCCA

Downstream 100 bases:

>100_bases
CCCAAGTACATGATCCCAAACGCAATCTGACCTCCTCTCCCCGTTCGACGGGTAAACCCAGTTCATCCAATACTGCGGGT
CCATCTTCATCCGCAAAATC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSRTYKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDLMLVQGRSLDKIAQAETLESY
PGLSQNLAKLTTSQYLAELTLYQALSGQPQTELWDLFCQQLTQLQNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTH
QPLDPPTSNPTWRVGFSAGAGGTVTLTGPPRPRTAIQQAAEQAIAYPLGADYRVQGKLSAQELALLQDLNPAEIQPASPL
PLPLIATYPLVIWQGVESALRHYAEAYFDRPIRSAALIDTCFTPLPDLTSVPS

Sequences:

>Translated_293_residues
MSRTYKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDLMLVQGRSLDKIAQAETLESY
PGLSQNLAKLTTSQYLAELTLYQALSGQPQTELWDLFCQQLTQLQNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTH
QPLDPPTSNPTWRVGFSAGAGGTVTLTGPPRPRTAIQQAAEQAIAYPLGADYRVQGKLSAQELALLQDLNPAEIQPASPL
PLPLIATYPLVIWQGVESALRHYAEAYFDRPIRSAALIDTCFTPLPDLTSVPS
>Mature_292_residues
SRTYKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDLMLVQGRSLDKIAQAETLESYP
GLSQNLAKLTTSQYLAELTLYQALSGQPQTELWDLFCQQLTQLQNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTHQ
PLDPPTSNPTWRVGFSAGAGGTVTLTGPPRPRTAIQQAAEQAIAYPLGADYRVQGKLSAQELALLQDLNPAEIQPASPLP
LPLIATYPLVIWQGVESALRHYAEAYFDRPIRSAALIDTCFTPLPDLTSVPS

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:
GO:0006281: DNA repair protein recO
GO:0006310: DNA repair protein recO
GO:0006974: DNA repair protein recO
GO:0008060: DNA repair protein recO
GO:0008270: DNA repair protein recO
GO:0032312: DNA repair protein recO

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_ACAM1 (B0C0B6)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001518926.1
- ProteinModelPortal:   B0C0B6
- SMR:   B0C0B6
- GeneID:   5683436
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_4634
- HOGENOM:   HBG634481
- OMA:   YKATGIN
- ProtClustDB:   PRK00085
- BioCyc:   AMAR329726:AM1_4634-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 31539; Mature: 31408

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTYKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDL
CCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHCCCEEEHHHHHH
MLVQGRSLDKIAQAETLESYPGLSQNLAKLTTSQYLAELTLYQALSGQPQTELWDLFCQQ
HHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LTQLQNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTHQPLDPPTSNPTWRVGFSAGA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCCCCCCCEEEEEECCC
GGTVTLTGPPRPRTAIQQAAEQAIAYPLGADYRVQGKLSAQELALLQDLNPAEIQPASPL
CCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCC
PLPLIATYPLVIWQGVESALRHYAEAYFDRPIRSAALIDTCFTPLPDLTSVPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SRTYKATGINLKSMPFGEADRLLTILTREQGLVRAVAPGCRKPKSKLGGRSALFVVNDL
CCCEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHCCCEEEHHHHHH
MLVQGRSLDKIAQAETLESYPGLSQNLAKLTTSQYLAELTLYQALSGQPQTELWDLFCQQ
HHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LTQLQNATLAQVPCCLIHGTLKLLAGAGIAPQVHACCVTHQPLDPPTSNPTWRVGFSAGA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCCCCCCCEEEEEECCC
GGTVTLTGPPRPRTAIQQAAEQAIAYPLGADYRVQGKLSAQELALLQDLNPAEIQPASPL
CCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCC
PLPLIATYPLVIWQGVESALRHYAEAYFDRPIRSAALIDTCFTPLPDLTSVPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA