| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is pdxA [H]
Identifier: 158337671
GI number: 158337671
Start: 4588355
End: 4589413
Strand: Reverse
Name: pdxA [H]
Synonym: AM1_4554
Alternate gene names: 158337671
Gene position: 4589413-4588355 (Counterclockwise)
Preceding gene: 158337672
Following gene: 158337669
Centisome position: 70.57
GC content: 51.94
Gene sequence:
>1059_bases ATGGCTGACTCTCATCCGCTACCCCAGCTTGCCATTCCCATGGGCGATTCTGCAGGGATTGGTCCTGAGGTCATTCTCAA AGCTTTAAGTTTTCCGCTTCTCAAAGACGTAGCTCATGTTTGCGTCATTGGGGAGCGGTCTTTATTTGAGGCCGTTTATG AACATCTCCAAAAGCAGACAGGTTTGGATGTAGATCAGACCCTAGCAAATCCAAAGAATCTTGATTTTTTGGAGGTAGGA TTGAAACTATCTCCTATTCCATGGGGAAAGCCTTCAGCAGCGACGGGGGCAGCCAGTTTTCAGTGTTTGTCTACTGCGAT TACAGGTGCCCTGGAAGGACGATTTGGTGGCATCGTCACTGGCCCCATTGCTAAGTCAGCTTGGAAGGCTGCCGGTCATC ACTATCCTGGGCAAACCGAATATTTGGCGGAGCGATCTCAAACCTCAGAATATGGCATGTTCTTTGTGGGTTCTTCCCCC TATACCGGGTGGCAACTCCGGACCTTATTGGCAACCACCCATATTCCACTGTCGGAGGTCCCTCGTCAGCTTTCTCCTGA GTTGTTGACGATGAAGGTGAGACTGCTGAAGAAGACCCTGCAGCATGAGTTTGGTATAGAGCATCCGAGGGTTGCGATCT CAGGTCTGAATCCTCACAGCGGTGAGCAAGGGCAGTTGGGGCGCGAAGAAATCGACTGGCTAATTCCGTGGATACGGGAG ATGCGATCGCAACACCCTGATCTGACCTTATCAGACCCCATTCCCCCGGACACCCTTTGGGTGGGACCAGGGCAAGCTTG GTATGGTCCCCGCGATAAAACAGCACAACCCACCACCTACGACGCCTACTTAGCCCTCTATCACGACCAAGGCTTAATTC CCGTTAAGCTGATGGCTTTTGACCGGGCCGTCAATACCACCATTGGTTTACCCTTTGTCCGCACATCTCCAGACCACGGT ACAGCCTTTGATATCGCAGGAAAAGGGATTGCCGATCCCACCAGTATGATTGCTGCGATTCAATTGGCCGCCAACCTAGT TCGCCAACGTTCCGGTTAG
Upstream 100 bases:
>100_bases ATGCTTCTGCTGAGGAAGCAGCTTCGGAACCCGAAGAAGTCACCTCTCCTGCATAAGGACTGTTCTTCACTCGATGCATA TGTTTGGATGATGAATCACA
Downstream 100 bases:
>100_bases CCAAATGTGAATGGAGAACAGCGTTGTCCAATACATGTATTTTTGCAGACCTCAGTTCAACCCAATATTTTGTGCTGCAT TTAGCTGTCAGATGATGCAG
Product: 4-hydroxythreonine-4-phosphate dehydrogenase
Products: NA
Alternate protein names: 4-(phosphohydroxy)-L-threonine dehydrogenase [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MADSHPLPQLAIPMGDSAGIGPEVILKALSFPLLKDVAHVCVIGERSLFEAVYEHLQKQTGLDVDQTLANPKNLDFLEVG LKLSPIPWGKPSAATGAASFQCLSTAITGALEGRFGGIVTGPIAKSAWKAAGHHYPGQTEYLAERSQTSEYGMFFVGSSP YTGWQLRTLLATTHIPLSEVPRQLSPELLTMKVRLLKKTLQHEFGIEHPRVAISGLNPHSGEQGQLGREEIDWLIPWIRE MRSQHPDLTLSDPIPPDTLWVGPGQAWYGPRDKTAQPTTYDAYLALYHDQGLIPVKLMAFDRAVNTTIGLPFVRTSPDHG TAFDIAGKGIADPTSMIAAIQLAANLVRQRSG
Sequences:
>Translated_352_residues MADSHPLPQLAIPMGDSAGIGPEVILKALSFPLLKDVAHVCVIGERSLFEAVYEHLQKQTGLDVDQTLANPKNLDFLEVG LKLSPIPWGKPSAATGAASFQCLSTAITGALEGRFGGIVTGPIAKSAWKAAGHHYPGQTEYLAERSQTSEYGMFFVGSSP YTGWQLRTLLATTHIPLSEVPRQLSPELLTMKVRLLKKTLQHEFGIEHPRVAISGLNPHSGEQGQLGREEIDWLIPWIRE MRSQHPDLTLSDPIPPDTLWVGPGQAWYGPRDKTAQPTTYDAYLALYHDQGLIPVKLMAFDRAVNTTIGLPFVRTSPDHG TAFDIAGKGIADPTSMIAAIQLAANLVRQRSG >Mature_351_residues ADSHPLPQLAIPMGDSAGIGPEVILKALSFPLLKDVAHVCVIGERSLFEAVYEHLQKQTGLDVDQTLANPKNLDFLEVGL KLSPIPWGKPSAATGAASFQCLSTAITGALEGRFGGIVTGPIAKSAWKAAGHHYPGQTEYLAERSQTSEYGMFFVGSSPY TGWQLRTLLATTHIPLSEVPRQLSPELLTMKVRLLKKTLQHEFGIEHPRVAISGLNPHSGEQGQLGREEIDWLIPWIREM RSQHPDLTLSDPIPPDTLWVGPGQAWYGPRDKTAQPTTYDAYLALYHDQGLIPVKLMAFDRAVNTTIGLPFVRTSPDHGT AFDIAGKGIADPTSMIAAIQLAANLVRQRSG
Specific function: Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) [H]
COG id: COG1995
COG function: function code H; Pyridoxal phosphate biosynthesis protein
Gene ontology:
GO:0005737: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0008615: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0016491: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0016616: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0042823: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0046872: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0050570: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0051287: 4-hydroxythreonine-4-phosphate dehydrogenase
GO:0055114: 4-hydroxythreonine-4-phosphate dehydrogenase
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pdxA family [H]
Homologues:
Organism=Escherichia coli, GI1786237, Length=274, Percent_Identity=40.1459854014599, Blast_Score=198, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005255 [H]
Pfam domain/function: PF04166 PdxA [H]
EC number: =1.1.1.262 [H]
Molecular weight: Translated: 38263; Mature: 38132
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSHPLPQLAIPMGDSAGIGPEVILKALSFPLLKDVAHVCVIGERSLFEAVYEHLQKQT CCCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GLDVDQTLANPKNLDFLEVGLKLSPIPWGKPSAATGAASFQCLSTAITGALEGRFGGIVT CCCHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE GPIAKSAWKAAGHHYPGQTEYLAERSQTSEYGMFFVGSSPYTGWQLRTLLATTHIPLSEV CHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHH PRQLSPELLTMKVRLLKKTLQHEFGIEHPRVAISGLNPHSGEQGQLGREEIDWLIPWIRE HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH MRSQHPDLTLSDPIPPDTLWVGPGQAWYGPRDKTAQPTTYDAYLALYHDQGLIPVKLMAF HHHCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHH DRAVNTTIGLPFVRTSPDHGTAFDIAGKGIADPTSMIAAIQLAANLVRQRSG HHHHHHHCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADSHPLPQLAIPMGDSAGIGPEVILKALSFPLLKDVAHVCVIGERSLFEAVYEHLQKQT CCCCCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GLDVDQTLANPKNLDFLEVGLKLSPIPWGKPSAATGAASFQCLSTAITGALEGRFGGIVT CCCHHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE GPIAKSAWKAAGHHYPGQTEYLAERSQTSEYGMFFVGSSPYTGWQLRTLLATTHIPLSEV CHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHH PRQLSPELLTMKVRLLKKTLQHEFGIEHPRVAISGLNPHSGEQGQLGREEIDWLIPWIRE HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH MRSQHPDLTLSDPIPPDTLWVGPGQAWYGPRDKTAQPTTYDAYLALYHDQGLIPVKLMAF HHHCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHH DRAVNTTIGLPFVRTSPDHGTAFDIAGKGIADPTSMIAAIQLAANLVRQRSG HHHHHHHCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]