| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337616
Identifier: 158337616
GI number: 158337616
Start: 4524372
End: 4524890
Strand: Reverse
Name: 158337616
Synonym: AM1_4497
Alternate gene names: NA
Gene position: 4524890-4524372 (Counterclockwise)
Preceding gene: 158337617
Following gene: 158337614
Centisome position: 69.57
GC content: 50.48
Gene sequence:
>519_bases TTGAGCCAGTCTCTCGATTTACCTCAGGTTGGCGACCCCAAAGCTGACGAGTTTCTACAAGAACTAGCAGCGATTCAACA GACCAGTTCCAAACGCATTGCCATTTTGGGTTCTCGCCACGTCCCCCTCATGCATCAGCACATCATCGAAATGATGAGCT ATGCATTAGCCCTTTCTGGAAACCGCCTCCTCACATCGGGTGCGATTGGCACCAATGCTGCGGCCATTCGAGGTGCGATG CGAGCGGATCCAAAGTTATTAACGGTGGTACTTCCCCAAAGCATGACGGAGCAGCCCCCAGAGTCTCAACGGCTATTGGA GAAGGTGATGCATCTGGTGGAAAAACCAGAACATGACAACCTGTCCCTGGCAGAAGCAAGTGCGATCTGCAACCAGGAGA TCGTCTCTCGATGTGATCAGCTCATTTGCTTTGCTTTCCATGACAGCCATACTTTGCTCAAGACCTGTCAAGAAGCTGAA GAACTGCGTAAGCTAGTGACCCTGTTCTATTTTGATTAG
Upstream 100 bases:
>100_bases CAAGGTCAACCTTGGCTGTAAAGAATAAACTCCATCCATCACCCCCAAAATCTGACTGACCTTTGTTAAAATAGCTGGGT TGTTTCGGCACAGTACCTCT
Downstream 100 bases:
>100_bases GATTATGCCTGGGAGGTCGAAGGCCGCTCAGGTAAATCGAGGGGACTAATATCCTCTCCAGCACCCTCACGCTCATTAGC TGCAAACATACGCTCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSQSLDLPQVGDPKADEFLQELAAIQQTSSKRIAILGSRHVPLMHQHIIEMMSYALALSGNRLLTSGAIGTNAAAIRGAM RADPKLLTVVLPQSMTEQPPESQRLLEKVMHLVEKPEHDNLSLAEASAICNQEIVSRCDQLICFAFHDSHTLLKTCQEAE ELRKLVTLFYFD
Sequences:
>Translated_172_residues MSQSLDLPQVGDPKADEFLQELAAIQQTSSKRIAILGSRHVPLMHQHIIEMMSYALALSGNRLLTSGAIGTNAAAIRGAM RADPKLLTVVLPQSMTEQPPESQRLLEKVMHLVEKPEHDNLSLAEASAICNQEIVSRCDQLICFAFHDSHTLLKTCQEAE ELRKLVTLFYFD >Mature_171_residues SQSLDLPQVGDPKADEFLQELAAIQQTSSKRIAILGSRHVPLMHQHIIEMMSYALALSGNRLLTSGAIGTNAAAIRGAMR ADPKLLTVVLPQSMTEQPPESQRLLEKVMHLVEKPEHDNLSLAEASAICNQEIVSRCDQLICFAFHDSHTLLKTCQEAEE LRKLVTLFYFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19107; Mature: 18976
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLDLPQVGDPKADEFLQELAAIQQTSSKRIAILGSRHVPLMHQHIIEMMSYALALSG CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC NRLLTSGAIGTNAAAIRGAMRADPKLLTVVLPQSMTEQPPESQRLLEKVMHLVEKPEHDN CEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCC LSLAEASAICNQEIVSRCDQLICFAFHDSHTLLKTCQEAEELRKLVTLFYFD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQSLDLPQVGDPKADEFLQELAAIQQTSSKRIAILGSRHVPLMHQHIIEMMSYALALSG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCC NRLLTSGAIGTNAAAIRGAMRADPKLLTVVLPQSMTEQPPESQRLLEKVMHLVEKPEHDN CEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCC LSLAEASAICNQEIVSRCDQLICFAFHDSHTLLKTCQEAEELRKLVTLFYFD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA