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The map label for this gene is ypfJ [H]

Identifier: 158337470

GI number: 158337470

Start: 4379326

End: 4379931

Strand: Direct

Name: ypfJ [H]

Synonym: AM1_4349

Alternate gene names: 158337470

Gene position: 4379326-4379931 (Clockwise)

Preceding gene: 158337469

Following gene: 158337471

Centisome position: 67.34

GC content: 52.81

Gene sequence:

>606_bases
TTGGCCACAGGGCTGGGCTTGACGGCATCTCAACCCGCTACCAGCCAAACCCTGCGCCAAAAAGTCAATTTTGCGAATTC
AGATATTAATGCCTTTTGGGATGAGGCGTTTCGGCAAATGGGTCGTAAATGGTATCGCCCCAAATCCTACACATACTATC
GGGCGGTCCGCACGGCCTGTGGCATCTCTGGTCCCTTTAATGCCCTCTACTGCCCTCGTGATCATGGCATCTACCTCAAT
ATCCCGTTTTTAGTCCGGGCTGATCGGCGCTGGGGAGATTTTGCTGCGATTACAATCATGGCCCATGAATATGGTCATGC
GGTTCAGCGCCAGCTCGGGCTAAGTCGCCTCAATCGCTACCTATACCAAGAAGAGCTGCAGGCGGACTGTTTTGCGGGGG
TTTATGCCCAATATGCGAGTCGTAAAGGCCTGCTTGATCCCAATGATGCCAAGGAAGGCTACTATCAGTCCTACTCCAGT
GGTCATGCTCGCTTTAATCCCAATACCCACGGCACTCGTGCTCAGCGGGCTCAGGCCTTTCGGACTGGCTATAGAAACGG
GTTCAGGAGTTGCTTAAGATATACCGTGATGAGGCTTAGGCGTTAG

Upstream 100 bases:

>100_bases
CTCTGAATCTCTCACTAGCCCTATGCTTTCCAGCCTTGCTCAGGAACATTGGTCCTTTAATCGACGTAGGCTTGTACCCT
CGCTGCTGCTCTCAGTAAGT

Downstream 100 bases:

>100_bases
TCTAACTCTTCTGTGATCTGTTACTGACTCAATAGTTTTAAGCTTGTGACCCAACCTGACACCCTTGCTCAACTGCTAAC
GGCTATTTCCACGGGTGAGG

Product: zinc metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MATGLGLTASQPATSQTLRQKVNFANSDINAFWDEAFRQMGRKWYRPKSYTYYRAVRTACGISGPFNALYCPRDHGIYLN
IPFLVRADRRWGDFAAITIMAHEYGHAVQRQLGLSRLNRYLYQEELQADCFAGVYAQYASRKGLLDPNDAKEGYYQSYSS
GHARFNPNTHGTRAQRAQAFRTGYRNGFRSCLRYTVMRLRR

Sequences:

>Translated_201_residues
MATGLGLTASQPATSQTLRQKVNFANSDINAFWDEAFRQMGRKWYRPKSYTYYRAVRTACGISGPFNALYCPRDHGIYLN
IPFLVRADRRWGDFAAITIMAHEYGHAVQRQLGLSRLNRYLYQEELQADCFAGVYAQYASRKGLLDPNDAKEGYYQSYSS
GHARFNPNTHGTRAQRAQAFRTGYRNGFRSCLRYTVMRLRR
>Mature_200_residues
ATGLGLTASQPATSQTLRQKVNFANSDINAFWDEAFRQMGRKWYRPKSYTYYRAVRTACGISGPFNALYCPRDHGIYLNI
PFLVRADRRWGDFAAITIMAHEYGHAVQRQLGLSRLNRYLYQEELQADCFAGVYAQYASRKGLLDPNDAKEGYYQSYSSG
HARFNPNTHGTRAQRAQAFRTGYRNGFRSCLRYTVMRLRR

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=223, Percent_Identity=30.4932735426009, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 23185; Mature: 23054

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGLGLTASQPATSQTLRQKVNFANSDINAFWDEAFRQMGRKWYRPKSYTYYRAVRTAC
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GISGPFNALYCPRDHGIYLNIPFLVRADRRWGDFAAITIMAHEYGHAVQRQLGLSRLNRY
CCCCCCCEEECCCCCCEEEECCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
LYQEELQADCFAGVYAQYASRKGLLDPNDAKEGYYQSYSSGHARFNPNTHGTRAQRAQAF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHH
RTGYRNGFRSCLRYTVMRLRR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATGLGLTASQPATSQTLRQKVNFANSDINAFWDEAFRQMGRKWYRPKSYTYYRAVRTAC
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GISGPFNALYCPRDHGIYLNIPFLVRADRRWGDFAAITIMAHEYGHAVQRQLGLSRLNRY
CCCCCCCEEECCCCCCEEEECCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH
LYQEELQADCFAGVYAQYASRKGLLDPNDAKEGYYQSYSSGHARFNPNTHGTRAQRAQAF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCHHHHHHHHH
RTGYRNGFRSCLRYTVMRLRR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]