| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is pntA [H]
Identifier: 158337468
GI number: 158337468
Start: 4375944
End: 4377560
Strand: Direct
Name: pntA [H]
Synonym: AM1_4347
Alternate gene names: 158337468
Gene position: 4375944-4377560 (Clockwise)
Preceding gene: 158337467
Following gene: 158337469
Centisome position: 67.28
GC content: 51.95
Gene sequence:
>1617_bases ATGACTGTTGCCGACAAGAAATTAGCGAACGCTGATAACCCTCAAGATCCAAAAACAGGCCTAAAAATCGGCATCCCGAA AGAAGTCTTTCCCGGCGAGCGCCGAGTCGCAGCGACCCCCGATACGGCTAAAACCCTGCAAAAAATGGGATTTGAAGTCT TAGTGGAATCTAAAGCAGGCGCTGGTGCCACGTTTTCCGATCAGGTCTATCAACAGGCTGGCTGCCAAGTCGTGGCAGAT ACCACTCAACTCTGGGAAACCGCCGATATTATTCTCAAGGTGCGGGCACCCCAGATGCACCCTACCCTGAATCGCCATGA AGCAGAACTTTTAAATGAAGGCAAAACCCTAATCAGCTTTATTTGGCCTGCTCAAAACGAAGACTTATTGAAGCAGTTAG CTGAGCAAAAAGCCAATGTTCTGGCGATGGATGCGATCCCTCGAATTAGCCGCGCTCAGAAAATGGATGCCCTGAGCTCC ATGGCCAATATTGCCGGCTATCGGGCTGTGGTGGAATCGGCGAATAACTTTGGTCGCTTTTTTACTGGACAAATCACCGC TGCGGGGAAAGTTCCTCCCGCTAAAGTGCTCGTGATTGGAGCTGGTGTTGCCGGTCTTGCCGCAATTGGTGCAGCTCGAG GTTTAGGCGCTGTGGTTCGCTCCTTCGATACTCGACCTGTGGTCAAAGAACAGGTGCAAAGTATGGGGGCTGAATTCCTA GAGCTGGAATTTGAGGAAGATGGCACCGGAGCAGGGGGCTATGCCAAAACCATGAGCCCTGAGTTTATTGCTGCTGAAAT GGAGCTGTTTGCTCAGCAAGCTGAAGAAGTAGATATCATCATTACCACTGCCTTGATCCCAGGTAAGAAAGCGCCGTTGC TGATTACCAAAGATATGGTGGAGAGCATGAAGGAAGGCTCTGTCGTCGTGGATATGGCAGCAGAGCAGGGGGGCAACTGC GAAGTCACCCGACCGAACGAAGTTTATCAACATCATGGTGTGACGATTGTTGGTCTGACGGATTTGCCCAGCCGCATGGC CAACCAATCAAGTCAGCTCTATGGCAACAACCTGTGCCATTTGCTTAAGGATATGGGTGGCGCTGAAGACTACAAAATTG ACTTTGAAGACGAAGTGGTGCGAGGCGCAACCGTTCTGCAAGAGGGCAAAATCACTTGGCCCCCACCTCAAGTCAGTCAG CCTTCTCCCCCTAAGCCTGCTGCCGAGGCTAAGCAACCCGCAATGCCCGCTGAGCCGGAAGTAAAAGAAAAATCGGTGAT TGGCCAATGGCTCCCCTTGATTGCAGTGGGTGCAGCCTTATTTGGCATTGGCTTAACCGCTCCTCCTTCTTTCCTGACTC ACTTCACCGTGTTTGTGTTGGCCTGTTTTGTGGGTTGGCAGGTGATTTGGAATGTGGCCCCTGCGTTGCATACGCCTTTG ATGAGTGTCACTAACGCTATTAGCGGCATCATTATTCTCGGGGGCATGCTGCAAATCTCGGGTCCCTTGGGTTCACCGAC CACGATACTGGGTGCGATCGCAATCCTAGTCGGCACCATCAACATCGCCGGGGGATTCCTCGTTACCCAACGGATGCTGC AAATGTTCCGCCGTTAG
Upstream 100 bases:
>100_bases AGTTTTTTGAAAACTATATCCCGCCTCTATATTCCTAGGGAGGTCAGACGCACCGTAATTTTTAGTTTCCGTTGAAGACT TACCACCGCAAGGAGCATTC
Downstream 100 bases:
>100_bases TCTCTGTTCTATTTTCCACACCTCTTTCCGCTGTCCTCAACTGGCTAGGACAGCGACTATCCCTTTTTTAGGAGTCCACT ATGACCAATAGCCTTGTCAC
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTVADKKLANADNPQDPKTGLKIGIPKEVFPGERRVAATPDTAKTLQKMGFEVLVESKAGAGATFSDQVYQQAGCQVVAD TTQLWETADIILKVRAPQMHPTLNRHEAELLNEGKTLISFIWPAQNEDLLKQLAEQKANVLAMDAIPRISRAQKMDALSS MANIAGYRAVVESANNFGRFFTGQITAAGKVPPAKVLVIGAGVAGLAAIGAARGLGAVVRSFDTRPVVKEQVQSMGAEFL ELEFEEDGTGAGGYAKTMSPEFIAAEMELFAQQAEEVDIIITTALIPGKKAPLLITKDMVESMKEGSVVVDMAAEQGGNC EVTRPNEVYQHHGVTIVGLTDLPSRMANQSSQLYGNNLCHLLKDMGGAEDYKIDFEDEVVRGATVLQEGKITWPPPQVSQ PSPPKPAAEAKQPAMPAEPEVKEKSVIGQWLPLIAVGAALFGIGLTAPPSFLTHFTVFVLACFVGWQVIWNVAPALHTPL MSVTNAISGIIILGGMLQISGPLGSPTTILGAIAILVGTINIAGGFLVTQRMLQMFRR
Sequences:
>Translated_538_residues MTVADKKLANADNPQDPKTGLKIGIPKEVFPGERRVAATPDTAKTLQKMGFEVLVESKAGAGATFSDQVYQQAGCQVVAD TTQLWETADIILKVRAPQMHPTLNRHEAELLNEGKTLISFIWPAQNEDLLKQLAEQKANVLAMDAIPRISRAQKMDALSS MANIAGYRAVVESANNFGRFFTGQITAAGKVPPAKVLVIGAGVAGLAAIGAARGLGAVVRSFDTRPVVKEQVQSMGAEFL ELEFEEDGTGAGGYAKTMSPEFIAAEMELFAQQAEEVDIIITTALIPGKKAPLLITKDMVESMKEGSVVVDMAAEQGGNC EVTRPNEVYQHHGVTIVGLTDLPSRMANQSSQLYGNNLCHLLKDMGGAEDYKIDFEDEVVRGATVLQEGKITWPPPQVSQ PSPPKPAAEAKQPAMPAEPEVKEKSVIGQWLPLIAVGAALFGIGLTAPPSFLTHFTVFVLACFVGWQVIWNVAPALHTPL MSVTNAISGIIILGGMLQISGPLGSPTTILGAIAILVGTINIAGGFLVTQRMLQMFRR >Mature_537_residues TVADKKLANADNPQDPKTGLKIGIPKEVFPGERRVAATPDTAKTLQKMGFEVLVESKAGAGATFSDQVYQQAGCQVVADT TQLWETADIILKVRAPQMHPTLNRHEAELLNEGKTLISFIWPAQNEDLLKQLAEQKANVLAMDAIPRISRAQKMDALSSM ANIAGYRAVVESANNFGRFFTGQITAAGKVPPAKVLVIGAGVAGLAAIGAARGLGAVVRSFDTRPVVKEQVQSMGAEFLE LEFEEDGTGAGGYAKTMSPEFIAAEMELFAQQAEEVDIIITTALIPGKKAPLLITKDMVESMKEGSVVVDMAAEQGGNCE VTRPNEVYQHHGVTIVGLTDLPSRMANQSSQLYGNNLCHLLKDMGGAEDYKIDFEDEVVRGATVLQEGKITWPPPQVSQP SPPKPAAEAKQPAMPAEPEVKEKSVIGQWLPLIAVGAALFGIGLTAPPSFLTHFTVFVLACFVGWQVIWNVAPALHTPLM SVTNAISGIIILGGMLQISGPLGSPTTILGAIAILVGTINIAGGFLVTQRMLQMFRR
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
GO:0008750: NAD(P) transhydrogenase, alpha subunit
GO:0015992: NAD(P) transhydrogenase, alpha subunit
GO:0016491: NAD(P) transhydrogenase, alpha subunit
GO:0055114: NAD(P) transhydrogenase, alpha subunit
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=544, Percent_Identity=52.5735294117647, Blast_Score=540, Evalue=1e-153, Organism=Homo sapiens, GI122939153, Length=544, Percent_Identity=52.5735294117647, Blast_Score=540, Evalue=1e-153, Organism=Escherichia coli, GI1787887, Length=526, Percent_Identity=59.5057034220532, Blast_Score=583, Evalue=1e-167, Organism=Caenorhabditis elegans, GI17550456, Length=523, Percent_Identity=53.5372848948375, Blast_Score=514, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 57399; Mature: 57268
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVADKKLANADNPQDPKTGLKIGIPKEVFPGERRVAATPDTAKTLQKMGFEVLVESKAG CCCCCCHHCCCCCCCCCCCCCEECCCHHHCCCCCEEECCCHHHHHHHHCCCEEEEECCCC AGATFSDQVYQQAGCQVVADTTQLWETADIILKVRAPQMHPTLNRHEAELLNEGKTLISF CCCCHHHHHHHHHCCEEEECHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEE IWPAQNEDLLKQLAEQKANVLAMDAIPRISRAQKMDALSSMANIAGYRAVVESANNFGRF ECCCCCHHHHHHHHHHHCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCE FTGQITAAGKVPPAKVLVIGAGVAGLAAIGAARGLGAVVRSFDTRPVVKEQVQSMGAEFL EEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHE ELEFEEDGTGAGGYAKTMSPEFIAAEMELFAQQAEEVDIIITTALIPGKKAPLLITKDMV EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEEEEHHHH ESMKEGSVVVDMAAEQGGNCEVTRPNEVYQHHGVTIVGLTDLPSRMANQSSQLYGNNLCH HHHHCCCEEEEEECCCCCCEEEECCHHHHHHCCEEEEECCCCHHHHHCCHHHHHHHHHHH LLKDMGGAEDYKIDFEDEVVRGATVLQEGKITWPPPQVSQPSPPKPAAEAKQPAMPAEPE HHHHCCCCCCEEECCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCC VKEKSVIGQWLPLIAVGAALFGIGLTAPPSFLTHFTVFVLACFVGWQVIWNVAPALHTPL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSVTNAISGIIILGGMLQISGPLGSPTTILGAIAILVGTINIAGGFLVTQRMLQMFRR HHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure TVADKKLANADNPQDPKTGLKIGIPKEVFPGERRVAATPDTAKTLQKMGFEVLVESKAG CCCCCHHCCCCCCCCCCCCCEECCCHHHCCCCCEEECCCHHHHHHHHCCCEEEEECCCC AGATFSDQVYQQAGCQVVADTTQLWETADIILKVRAPQMHPTLNRHEAELLNEGKTLISF CCCCHHHHHHHHHCCEEEECHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEE IWPAQNEDLLKQLAEQKANVLAMDAIPRISRAQKMDALSSMANIAGYRAVVESANNFGRF ECCCCCHHHHHHHHHHHCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCE FTGQITAAGKVPPAKVLVIGAGVAGLAAIGAARGLGAVVRSFDTRPVVKEQVQSMGAEFL EEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHE ELEFEEDGTGAGGYAKTMSPEFIAAEMELFAQQAEEVDIIITTALIPGKKAPLLITKDMV EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEEEEHHHH ESMKEGSVVVDMAAEQGGNCEVTRPNEVYQHHGVTIVGLTDLPSRMANQSSQLYGNNLCH HHHHCCCEEEEEECCCCCCEEEECCHHHHHHCCEEEEECCCCHHHHHCCHHHHHHHHHHH LLKDMGGAEDYKIDFEDEVVRGATVLQEGKITWPPPQVSQPSPPKPAAEAKQPAMPAEPE HHHHCCCCCCEEECCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCC VKEKSVIGQWLPLIAVGAALFGIGLTAPPSFLTHFTVFVLACFVGWQVIWNVAPALHTPL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSVTNAISGIIILGGMLQISGPLGSPTTILGAIAILVGTINIAGGFLVTQRMLQMFRR HHHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]