Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 158337358

GI number: 158337358

Start: 4255348

End: 4256097

Strand: Direct

Name: yrbE [C]

Synonym: AM1_4236

Alternate gene names: 158337358

Gene position: 4255348-4256097 (Clockwise)

Preceding gene: 158337356

Following gene: 158337359

Centisome position: 65.43

GC content: 50.53

Gene sequence:

>750_bases
TTGGTTGCAGCCATATTTCTAGGCGGGCAAGTGGTGGTGCATTTGCTTAGGGGCAAAATTCATCGCCGCAATACCATTGA
GCAGATGGCGATTGTAGGACCAGAGTCTTTGCTGGTTGCCCTATTGACCGCTAGCTTTGTGGGCATGGTATTTACCATTC
AAGTCGCTAGAGAGTTTATTGCCTTTGGTCTAGTGCAGACCGTGGGGGGCGTATTGGCCCTCGCCCTCACCCGAGAATTG
GCTCCGGTGCTAACCGCCGTGATTATTACAGGGCGAGTTTGCTCGGCCTTCGCGGCTGAAATTGGGACGATGCGGGTGAC
AGAACAGATCGATGCCCTCCAAATGCTGGATACGGATCCAGTGGATTATCTAGTTGTACCTCGGCTATTGGCTTGTACCT
TGATGTTGCCGATTTTGACTTTAATTTCTCTGGTGGCGGGGGTAACGGGTGGCATGGTGGTGGCGTCTGTTCTTTATGAC
ATTCCCTATAGCGTTTTCTTAGATTCAGTCCACAGCTTTTTGGGGGTTTGGGACATCTGGAACTCCATGATTAAGGCTGC
TATTTTTGGTGGCATTATCGCCATTGTTGGCTCTAGCTGGGGGTTAACCACCTATGGTGGAGCCAAAGGGGTGGGACAAT
CTACCACCGCAGCGGTGGTAACAGCCCTAGTGATGGTGTTTATGACCAACTTTTTCTTGTCTTGGGTGATGTTTCAAGGG
GCAGGAGGAACAGCCTTACAAAACTTGTGA

Upstream 100 bases:

>100_bases
CCCCCAAACCCTGCCTTCTGTTCCCTGTTGCGAAAGCCCAGGTTAGGTGTTTGTGAAATCTCTACTGGCCTGGACGGGAT
TCAATATTTGGAGCCGTCGC

Downstream 100 bases:

>100_bases
AGCAGAACCCCTTAGAATGGAAAACAGTTTGCTCACCCTATGAATGCGAAATGGCTGTTTCTCAGGTTTCTGATACACAA
TCAACGGTAGTTTTAACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVAAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAFGLVQTVGGVLALALTREL
APVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVDYLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYD
IPYSVFLDSVHSFLGVWDIWNSMIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQG
AGGTALQNL

Sequences:

>Translated_249_residues
MVAAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAFGLVQTVGGVLALALTREL
APVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVDYLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYD
IPYSVFLDSVHSFLGVWDIWNSMIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQG
AGGTALQNL
>Mature_249_residues
MVAAIFLGGQVVVHLLRGKIHRRNTIEQMAIVGPESLLVALLTASFVGMVFTIQVAREFIAFGLVQTVGGVLALALTREL
APVLTAVIITGRVCSAFAAEIGTMRVTEQIDALQMLDTDPVDYLVVPRLLACTLMLPILTLISLVAGVTGGMVVASVLYD
IPYSVFLDSVHSFLGVWDIWNSMIKAAIFGGIIAIVGSSWGLTTYGGAKGVGQSTTAAVVTALVMVFMTNFFLSWVMFQG
AGGTALQNL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=222, Percent_Identity=30.6306306306306, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26325; Mature: 26325

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHCCC
>Mature Secondary Structure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CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]