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The map label for this gene is cpcS [H]

Identifier: 158337337

GI number: 158337337

Start: 4236291

End: 4236884

Strand: Reverse

Name: cpcS [H]

Synonym: AM1_4215

Alternate gene names: 158337337

Gene position: 4236884-4236291 (Counterclockwise)

Preceding gene: 158337338

Following gene: 158337335

Centisome position: 65.15

GC content: 52.19

Gene sequence:

>594_bases
ATGAATGCCCTAGAATTTTTCCAACTCAGCGAAGGCCGGTGGCGGTCCCATCGCATTACCCACCATTTGCTCCTTCGCCG
GTCCGAGTCGGGAAATACAGAAATCGAGGTCCAGGTCTTAGCCCCAGATGACCCCAAAGTCATTGAAATTTGCCAGTTAC
ATCATGCTCAACCCCACTTAGCCATCGGCGGGTGTTTTGTGCAGTGGCGAGGTGCAATGGCCTGGGATCAGGAGGAGAAC
GACTCCCATCGGGGGTCAACGGTATTTGTTTTAGTCCCCCATGAAGGTAGTAATAACGCCGGTCAGTTATTGCGGGAGCG
GGGGTATGCTGAGAGCGTTCCCGTCGTGGGGCAGTATCAGGTGGATGCGCAAAATGGCCTCGTTTTAACCACCGAATATG
ACACTATGAGTTCTCAAGAGCGGTTTTGGTTTGCCAATCCCAACTTGCGACTGCGCACCACGACGGTCAAAAGCTTTGGT
GGATTTAATACTACCTCTTTTTGTGCAGAGTCAAAGCTAGTCAGTGATCAGATGGCCACTACTCCCCCACCTGAAACACC
CCCGCACCCTAATCATTCTTGGCTAGGGTGGTAA

Upstream 100 bases:

>100_bases
AATGGTGAAGATGAGAGCGATCTCCCCGATGAGACAGAAGAGGAATAGCTCCACCCCATGGATTGACCGAATGCCCCCAC
TCGATTGAGCAAGCGCTAAC

Downstream 100 bases:

>100_bases
GTGAGCTAGGCTTGGGCCGGCATTTCTAAAGAGTCTGCTTCATCAGCCGCACGCTTGGCTAAATCGTCACGATAGACGTT
GAGGTCAAACCAGAAGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNALEFFQLSEGRWRSHRITHHLLLRRSESGNTEIEVQVLAPDDPKVIEICQLHHAQPHLAIGGCFVQWRGAMAWDQEEN
DSHRGSTVFVLVPHEGSNNAGQLLRERGYAESVPVVGQYQVDAQNGLVLTTEYDTMSSQERFWFANPNLRLRTTTVKSFG
GFNTTSFCAESKLVSDQMATTPPPETPPHPNHSWLGW

Sequences:

>Translated_197_residues
MNALEFFQLSEGRWRSHRITHHLLLRRSESGNTEIEVQVLAPDDPKVIEICQLHHAQPHLAIGGCFVQWRGAMAWDQEEN
DSHRGSTVFVLVPHEGSNNAGQLLRERGYAESVPVVGQYQVDAQNGLVLTTEYDTMSSQERFWFANPNLRLRTTTVKSFG
GFNTTSFCAESKLVSDQMATTPPPETPPHPNHSWLGW
>Mature_197_residues
MNALEFFQLSEGRWRSHRITHHLLLRRSESGNTEIEVQVLAPDDPKVIEICQLHHAQPHLAIGGCFVQWRGAMAWDQEEN
DSHRGSTVFVLVPHEGSNNAGQLLRERGYAESVPVVGQYQVDAQNGLVLTTEYDTMSSQERFWFANPNLRLRTTTVKSFG
GFNTTSFCAESKLVSDQMATTPPPETPPHPNHSWLGW

Specific function: Attaches a phycocyanobilin (PCB) chromophore to 'Cys-82' of the C-phycocyanain beta subunit (PhcB) and the unique PCB that is attached to allophyocyanin alpha and beta subunits (ApcA and ApcB). In vitro, and probably also in vivo, chromophorylates ApcD an

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 22251; Mature: 22251

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALEFFQLSEGRWRSHRITHHLLLRRSESGNTEIEVQVLAPDDPKVIEICQLHHAQPHL
CCHHHEEEECCCCCCHHHHEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCE
AIGGCFVQWRGAMAWDQEENDSHRGSTVFVLVPHEGSNNAGQLLRERGYAESVPVVGQYQ
EEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEE
VDAQNGLVLTTEYDTMSSQERFWFANPNLRLRTTTVKSFGGFNTTSFCAESKLVSDQMAT
EECCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
TPPPETPPHPNHSWLGW
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNALEFFQLSEGRWRSHRITHHLLLRRSESGNTEIEVQVLAPDDPKVIEICQLHHAQPHL
CCHHHEEEECCCCCCHHHHEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCE
AIGGCFVQWRGAMAWDQEENDSHRGSTVFVLVPHEGSNNAGQLLRERGYAESVPVVGQYQ
EEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEE
VDAQNGLVLTTEYDTMSSQERFWFANPNLRLRTTTVKSFGGFNTTSFCAESKLVSDQMAT
EECCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCC
TPPPETPPHPNHSWLGW
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA