Click here to switch to the map view.

The map label for this gene is 158337307

Identifier: 158337307

GI number: 158337307

Start: 4211145

End: 4211780

Strand: Reverse

Name: 158337307

Synonym: AM1_4185

Alternate gene names: NA

Gene position: 4211780-4211145 (Counterclockwise)

Preceding gene: 158337310

Following gene: 158337300

Centisome position: 64.76

GC content: 50.47

Gene sequence:

>636_bases
TTGAGTTCCACAGTTCACCACCGCAAAGCCCAAGGAGAACAAACCCGTAGAGCCATTTTGCAATGTGCCATGGATTTGGC
TTCAGTCGATGGCCTGACTGGACTCTCCATTGGCGGTCTTGCCAAAGAATTGCAGATGAGTAAAAGTGGCTTATTTGCCC
ATTTTGGATCTAAAGAAGCCCTACAATTAGCGGTGATTGAAGGGGCTCGTCATTTAGTGTTACGAGAAGTTGTCCGGCCC
GCCCTCCGCGCCCCCAAAGGGTTACCGCGTTTATGGTCTCTTTGCGAAGCCTGGCTGCACTATACCGAGCAGCAACTGTT
TCGGGGGGGATGTTTTTTCGCAGCCACATCTACCGAATTTAATAGTCGACCTGGCCCCATTCGCGATCGCTTAGCCGACA
TTATGGCTGAGCGACAGCAAACCTTTGCCCGTCTTGTTGCGAGAGCCCAAGAAGTTGGAGATATCCATAGTAGTGTCGAT
CCTGTTCAGCTGGCTTACGAGCTAGATATGCTGCTATTTGGAGCAAACTGGGCGTTTCAACTCTATGGAGATGGGGATGT
GATTGTGCGATCGCAAACCGCAATGCGCCATCGCCTCAAATCCGTTTGTACTCATCCAGAAGACTTTGCCTTTTGA

Upstream 100 bases:

>100_bases
CCAACTGCCAGGATATCGAGGGCCAGGCCGATCTACCCCCTCCAACCAGCTGACAAAAGTTTCAAGTTATAATCAAGCCC
ATTATCATTTCACCTAGATT

Downstream 100 bases:

>100_bases
GGTGGCGATCCCCTCACCACCGTTAGATGCTTAAGGGTTTTGGTCAGGAGACATGACGATGGGACTGCCAGCACGCTGTT
GAGGAGAGCAGCTGAGTGAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSSTVHHRKAQGEQTRRAILQCAMDLASVDGLTGLSIGGLAKELQMSKSGLFAHFGSKEALQLAVIEGARHLVLREVVRP
ALRAPKGLPRLWSLCEAWLHYTEQQLFRGGCFFAATSTEFNSRPGPIRDRLADIMAERQQTFARLVARAQEVGDIHSSVD
PVQLAYELDMLLFGANWAFQLYGDGDVIVRSQTAMRHRLKSVCTHPEDFAF

Sequences:

>Translated_211_residues
MSSTVHHRKAQGEQTRRAILQCAMDLASVDGLTGLSIGGLAKELQMSKSGLFAHFGSKEALQLAVIEGARHLVLREVVRP
ALRAPKGLPRLWSLCEAWLHYTEQQLFRGGCFFAATSTEFNSRPGPIRDRLADIMAERQQTFARLVARAQEVGDIHSSVD
PVQLAYELDMLLFGANWAFQLYGDGDVIVRSQTAMRHRLKSVCTHPEDFAF
>Mature_210_residues
SSTVHHRKAQGEQTRRAILQCAMDLASVDGLTGLSIGGLAKELQMSKSGLFAHFGSKEALQLAVIEGARHLVLREVVRPA
LRAPKGLPRLWSLCEAWLHYTEQQLFRGGCFFAATSTEFNSRPGPIRDRLADIMAERQQTFARLVARAQEVGDIHSSVDP
VQLAYELDMLLFGANWAFQLYGDGDVIVRSQTAMRHRLKSVCTHPEDFAF

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23494; Mature: 23363

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTVHHRKAQGEQTRRAILQCAMDLASVDGLTGLSIGGLAKELQMSKSGLFAHFGSKEA
CCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHH
LQLAVIEGARHLVLREVVRPALRAPKGLPRLWSLCEAWLHYTEQQLFRGGCFFAATSTEF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
NSRPGPIRDRLADIMAERQQTFARLVARAQEVGDIHSSVDPVQLAYELDMLLFGANWAFQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCEEEE
LYGDGDVIVRSQTAMRHRLKSVCTHPEDFAF
EECCCCEEEECHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SSTVHHRKAQGEQTRRAILQCAMDLASVDGLTGLSIGGLAKELQMSKSGLFAHFGSKEA
CCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHH
LQLAVIEGARHLVLREVVRPALRAPKGLPRLWSLCEAWLHYTEQQLFRGGCFFAATSTEF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
NSRPGPIRDRLADIMAERQQTFARLVARAQEVGDIHSSVDPVQLAYELDMLLFGANWAFQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCEEEE
LYGDGDVIVRSQTAMRHRLKSVCTHPEDFAF
EECCCCEEEECHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA