| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337300
Identifier: 158337300
GI number: 158337300
Start: 4206237
End: 4207502
Strand: Reverse
Name: 158337300
Synonym: AM1_4178
Alternate gene names: NA
Gene position: 4207502-4206237 (Counterclockwise)
Preceding gene: 158337307
Following gene: 158337299
Centisome position: 64.69
GC content: 46.84
Gene sequence:
>1266_bases ATGCTGCAATCTAATATCTTAAGGCTTGCCCGTCAGGGTCAACCTGACGCCATCACCTATGCTCTCAATTATGTGTTGCA AACCCTAGCTGTAACGGGTAGAGCAATTATTGAAGCTGAAAACATTATTTTTATTATCCAAAAATCAGACGGTACTCCAC CCAGAGCACCTATTGAGAAATACATTAAAAACTTCCTGCTTCATCTTAAAATTCCCTTGATTAGACAAGTCGAAATCTAC GCTAAGGATACCCCCACTCAATCCTTGCAGTGGTTTAGTCAGTTCTCAATTGAATCTTTAAACTCCAAACCCTCGAATGT TGGGTCATCCCAATCGACTGAGCAGAGCACTTCATTCCCCTCTGCTGCCGCTTATGCGACAGGCAACGCCCCAGCGGGTC CAGATGACACAACTCCCCGTACTACTCCAGATGCCAACACCCCTTGGAATACGCCAGCTGCTGCAACGGACGTTCAAACG CCAGATCCAGTTGACTTTGAGCAGTTACCTCAAGACTTACAACAACGCATCAAAGCAGCAGGGCTGAGGGCGGGAGAAAC TCGGTCCTGGCAAGAAGCCCAGAAAATGTATAACAAAATCCCTAAAAATGTCTGTCGTCTAGGAGCCAAGGGCATTAGTC AATATAAACAGAATCACGATTGGAGCCATAAAAAATCCCATGCCCACGGGGGATCTAACAAGGCGAGTAATGGTGACTGG GAAGCCTCATCCGTAAATCGGGCAAGGGGTCAAAAAAATATCACTCCCACCGAACAACAAAATATTGCCAAGGCCAAAGC AAAGATTAACTTTCAAGCAGGCACAAAGGTCGTTGCCACCCAGGCCGTTAAAGCTGGAAAATCAGCTTTGGGATTTGAAT TAGCTTTTAGTGGTCTGAATAATTTTGTGGCAGTTCAGCAAGGCCAAAAATCGGTTGAAGATGCCCTAGTGGATACGTTG AAAGCCTCTGCAACTGCTGCGGCAACAACGACCGTTGTCACAGGTGGCATTGTAGCCATTTCTATCGTCTTTCCCCCAGC AGGAGCCGCTTTTGCAACGGCTGCACCAGTACTGAAAATTGTCGGTAAGGTGAATTGCCTCAAGCGGGTGATCGGTATCC TATCGGAGAGTGACAAGGTCGAAGGGGCGGATCAAATTCAGGCATTAATGGACTCCTACGGTTTGGATGAAAAGGAGCTG ATCTACCGAGACTTGGAGATGGATGATGATCTGGCCAAATTAAAGCTCGATATGGGGATGGCTTAA
Upstream 100 bases:
>100_bases AAATGTATATTTATATTTTAAATCCAATCAAAAAACATACAGCTATTGAGACATAGCCCACAAAAACGAATAAATTTTCT TCTATTCTTAAAAAGTAGTT
Downstream 100 bases:
>100_bases AGCCTCCCCATCACCAGAATGTTTCACGGCTGGATGTCCAACCCAATTGAACGAGCAGTGCTATCTAACGGATAGTGCTT CAGAATGGCACTATGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MLQSNILRLARQGQPDAITYALNYVLQTLAVTGRAIIEAENIIFIIQKSDGTPPRAPIEKYIKNFLLHLKIPLIRQVEIY AKDTPTQSLQWFSQFSIESLNSKPSNVGSSQSTEQSTSFPSAAAYATGNAPAGPDDTTPRTTPDANTPWNTPAAATDVQT PDPVDFEQLPQDLQQRIKAAGLRAGETRSWQEAQKMYNKIPKNVCRLGAKGISQYKQNHDWSHKKSHAHGGSNKASNGDW EASSVNRARGQKNITPTEQQNIAKAKAKINFQAGTKVVATQAVKAGKSALGFELAFSGLNNFVAVQQGQKSVEDALVDTL KASATAAATTTVVTGGIVAISIVFPPAGAAFATAAPVLKIVGKVNCLKRVIGILSESDKVEGADQIQALMDSYGLDEKEL IYRDLEMDDDLAKLKLDMGMA
Sequences:
>Translated_421_residues MLQSNILRLARQGQPDAITYALNYVLQTLAVTGRAIIEAENIIFIIQKSDGTPPRAPIEKYIKNFLLHLKIPLIRQVEIY AKDTPTQSLQWFSQFSIESLNSKPSNVGSSQSTEQSTSFPSAAAYATGNAPAGPDDTTPRTTPDANTPWNTPAAATDVQT PDPVDFEQLPQDLQQRIKAAGLRAGETRSWQEAQKMYNKIPKNVCRLGAKGISQYKQNHDWSHKKSHAHGGSNKASNGDW EASSVNRARGQKNITPTEQQNIAKAKAKINFQAGTKVVATQAVKAGKSALGFELAFSGLNNFVAVQQGQKSVEDALVDTL KASATAAATTTVVTGGIVAISIVFPPAGAAFATAAPVLKIVGKVNCLKRVIGILSESDKVEGADQIQALMDSYGLDEKEL IYRDLEMDDDLAKLKLDMGMA >Mature_421_residues MLQSNILRLARQGQPDAITYALNYVLQTLAVTGRAIIEAENIIFIIQKSDGTPPRAPIEKYIKNFLLHLKIPLIRQVEIY AKDTPTQSLQWFSQFSIESLNSKPSNVGSSQSTEQSTSFPSAAAYATGNAPAGPDDTTPRTTPDANTPWNTPAAATDVQT PDPVDFEQLPQDLQQRIKAAGLRAGETRSWQEAQKMYNKIPKNVCRLGAKGISQYKQNHDWSHKKSHAHGGSNKASNGDW EASSVNRARGQKNITPTEQQNIAKAKAKINFQAGTKVVATQAVKAGKSALGFELAFSGLNNFVAVQQGQKSVEDALVDTL KASATAAATTTVVTGGIVAISIVFPPAGAAFATAAPVLKIVGKVNCLKRVIGILSESDKVEGADQIQALMDSYGLDEKEL IYRDLEMDDDLAKLKLDMGMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45350; Mature: 45350
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSNILRLARQGQPDAITYALNYVLQTLAVTGRAIIEAENIIFIIQKSDGTPPRAPIEK CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHEEEECCEEEEEECCCCCCCCCHHHH YIKNFLLHLKIPLIRQVEIYAKDTPTQSLQWFSQFSIESLNSKPSNVGSSQSTEQSTSFP HHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC SAAAYATGNAPAGPDDTTPRTTPDANTPWNTPAAATDVQTPDPVDFEQLPQDLQQRIKAA CHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GLRAGETRSWQEAQKMYNKIPKNVCRLGAKGISQYKQNHDWSHKKSHAHGGSNKASNGDW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC EASSVNRARGQKNITPTEQQNIAKAKAKINFQAGTKVVATQAVKAGKSALGFELAFSGLN CHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCC NFVAVQQGQKSVEDALVDTLKASATAAATTTVVTGGIVAISIVFPPAGAAFATAAPVLKI CCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCHHHHHHHHHHH VGKVNCLKRVIGILSESDKVEGADQIQALMDSYGLDEKELIYRDLEMDDDLAKLKLDMGM HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCC A C >Mature Secondary Structure MLQSNILRLARQGQPDAITYALNYVLQTLAVTGRAIIEAENIIFIIQKSDGTPPRAPIEK CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHEEEECCEEEEEECCCCCCCCCHHHH YIKNFLLHLKIPLIRQVEIYAKDTPTQSLQWFSQFSIESLNSKPSNVGSSQSTEQSTSFP HHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC SAAAYATGNAPAGPDDTTPRTTPDANTPWNTPAAATDVQTPDPVDFEQLPQDLQQRIKAA CHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GLRAGETRSWQEAQKMYNKIPKNVCRLGAKGISQYKQNHDWSHKKSHAHGGSNKASNGDW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCC EASSVNRARGQKNITPTEQQNIAKAKAKINFQAGTKVVATQAVKAGKSALGFELAFSGLN CHHHHHHHCCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCC NFVAVQQGQKSVEDALVDTLKASATAAATTTVVTGGIVAISIVFPPAGAAFATAAPVLKI CCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCHHHHHHHHHHH VGKVNCLKRVIGILSESDKVEGADQIQALMDSYGLDEKELIYRDLEMDDDLAKLKLDMGM HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA