| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337289
Identifier: 158337289
GI number: 158337289
Start: 4199832
End: 4200338
Strand: Direct
Name: 158337289
Synonym: AM1_4167
Alternate gene names: NA
Gene position: 4199832-4200338 (Clockwise)
Preceding gene: 158337288
Following gene: 158337290
Centisome position: 64.58
GC content: 50.3
Gene sequence:
>507_bases GTGCGCCAGGTTTGCCAACTGTATGAATCAGCAGCTGAACTGGAAGCTCACCAGATTCACCTTGTTAGTACGGATGAAAT GACTGGCATTCAGGCGCTTGAACGACTGCACCCAGACCAAGCTATGCAACCAGGTCAACCGCGTCGTTTGGAATTTGAAT ATGAGCGGCATGGTACCCTCAGTCTCATCGCCAACTGGCATGTGGCTCTGGGAAAGGTGATTGCGCCTTCTATCGGACCC ACGCGAAAAGAATTTGACTTTGCCAATCATATTGCCAAGACAGTTGAAACAGCACCGGACGATGGGTGGGTTTTTCTGCT CGACCAGCTCAATACCCATCGATCTGCTTCCCTTGTGCGATGGGTCGCTGTCTGTTGCGGTATTGATTCAGATTTAGGCG TTAAGGGTCAATCTGGTATCCTTCAATCGATGGAAACTCACACGGCCTTCTTGAGCGACCCCAGCCATCGGATCCGATTT GTTTATATCCCCAAACATACCTCCTGA
Upstream 100 bases:
>100_bases AGTGTGAGACGTTTTTTGGGGAGAGGCTGAGCTGCAGCCTCATCGGAGTCGCTATTGGCTCAATGCTAACCCTGAGGAAC CAGAAGCGTTCGAGGCGAAA
Downstream 100 bases:
>100_bases CTCAATCAGATTGAATGCTGGTTTAGTATTTTGGTGCGTCGATTGATTCGTCGAGGAAATTTCACCTCCACGGATGATTT GCAACAGCGCATCCTCGATT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRQVCQLYESAAELEAHQIHLVSTDEMTGIQALERLHPDQAMQPGQPRRLEFEYERHGTLSLIANWHVALGKVIAPSIGP TRKEFDFANHIAKTVETAPDDGWVFLLDQLNTHRSASLVRWVAVCCGIDSDLGVKGQSGILQSMETHTAFLSDPSHRIRF VYIPKHTS
Sequences:
>Translated_168_residues MRQVCQLYESAAELEAHQIHLVSTDEMTGIQALERLHPDQAMQPGQPRRLEFEYERHGTLSLIANWHVALGKVIAPSIGP TRKEFDFANHIAKTVETAPDDGWVFLLDQLNTHRSASLVRWVAVCCGIDSDLGVKGQSGILQSMETHTAFLSDPSHRIRF VYIPKHTS >Mature_168_residues MRQVCQLYESAAELEAHQIHLVSTDEMTGIQALERLHPDQAMQPGQPRRLEFEYERHGTLSLIANWHVALGKVIAPSIGP TRKEFDFANHIAKTVETAPDDGWVFLLDQLNTHRSASLVRWVAVCCGIDSDLGVKGQSGILQSMETHTAFLSDPSHRIRF VYIPKHTS
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18869; Mature: 18869
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVCQLYESAAELEAHQIHLVSTDEMTGIQALERLHPDQAMQPGQPRRLEFEYERHGTL CHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEE SLIANWHVALGKVIAPSIGPTRKEFDFANHIAKTVETAPDDGWVFLLDQLNTHRSASLVR EEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH WVAVCCGIDSDLGVKGQSGILQSMETHTAFLSDPSHRIRFVYIPKHTS HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure MRQVCQLYESAAELEAHQIHLVSTDEMTGIQALERLHPDQAMQPGQPRRLEFEYERHGTL CHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEE SLIANWHVALGKVIAPSIGPTRKEFDFANHIAKTVETAPDDGWVFLLDQLNTHRSASLVR EEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH WVAVCCGIDSDLGVKGQSGILQSMETHTAFLSDPSHRIRFVYIPKHTS HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA