Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337288

Identifier: 158337288

GI number: 158337288

Start: 4198762

End: 4199094

Strand: Direct

Name: 158337288

Synonym: AM1_4165

Alternate gene names: NA

Gene position: 4198762-4199094 (Clockwise)

Preceding gene: 158337287

Following gene: 158337289

Centisome position: 64.56

GC content: 49.85

Gene sequence:

>333_bases
ATGGCCAAGCCAGCTAAGAAGCTCGTTATCGTTACGGAAAAATTGTTACTGAAAAAGATTGCTCAGATTATTGATGAAGC
CGGTGCGACTGGTTATACAGTGGTGGATGCTGGTGGTAAAGGCAGTCGCAATGTGCGCTCGTCGGGACAGCCCAGCGTCT
CTGACACCTTCTCGAATATAAAAATCGAGGTGCTGACCGAAACGCGGGAGATGGCCATCCAGATTTCGGATGAGGTAGCG
GCACAGTTTTTTGATGATTATTCTGGCATCGCCTATCTATGTGATGCGGAGGTATTGAGCGCCCACAAGTTCTGTGGGCC
AGACGGGTGTTGA

Upstream 100 bases:

>100_bases
TCGACTCAGCGACTAATGGAGCGTTTCGGTGAGTGGGATACTACCGTCTCTCTGGATTTATAGATCGTTTAATGAATACA
CCTATCAGGAGGTAACCGAT

Downstream 100 bases:

>100_bases
ATCAAGACGACGCAGCTTCAAACAGTAAGAGCCGGTTGTTTGGGGCTGCATCCCCTCAAGATATTGATGCTAGTCCTAGA
TTTTGAAGATAACCCATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAKPAKKLVIVTEKLLLKKIAQIIDEAGATGYTVVDAGGKGSRNVRSSGQPSVSDTFSNIKIEVLTETREMAIQISDEVA
AQFFDDYSGIAYLCDAEVLSAHKFCGPDGC

Sequences:

>Translated_110_residues
MAKPAKKLVIVTEKLLLKKIAQIIDEAGATGYTVVDAGGKGSRNVRSSGQPSVSDTFSNIKIEVLTETREMAIQISDEVA
AQFFDDYSGIAYLCDAEVLSAHKFCGPDGC
>Mature_109_residues
AKPAKKLVIVTEKLLLKKIAQIIDEAGATGYTVVDAGGKGSRNVRSSGQPSVSDTFSNIKIEVLTETREMAIQISDEVAA
QFFDDYSGIAYLCDAEVLSAHKFCGPDGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable). Cell membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011322 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11743; Mature: 11612

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPAKKLVIVTEKLLLKKIAQIIDEAGATGYTVVDAGGKGSRNVRSSGQPSVSDTFSNI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCE
KIEVLTETREMAIQISDEVAAQFFDDYSGIAYLCDAEVLSAHKFCGPDGC
EEEEEECCCHHEEEHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKPAKKLVIVTEKLLLKKIAQIIDEAGATGYTVVDAGGKGSRNVRSSGQPSVSDTFSNI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCE
KIEVLTETREMAIQISDEVAAQFFDDYSGIAYLCDAEVLSAHKFCGPDGC
EEEEEECCCHHEEEHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]