| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is epsH
Identifier: 158337256
GI number: 158337256
Start: 4168949
End: 4170475
Strand: Direct
Name: epsH
Synonym: AM1_4133
Alternate gene names: NA
Gene position: 4168949-4170475 (Clockwise)
Preceding gene: 158337255
Following gene: 158337257
Centisome position: 64.1
GC content: 52.52
Gene sequence:
>1527_bases ATGAACCCCTTTAGTCTTTGGCAACGGTACCAACTGGCCCAACGCCCTGAGCTGTGGTTGGGAGCTATTGCGGTGGGTTT AGCGCTTCTCAACTTGAGCTTGGCGTGGATACACACCCGGAATGCCGATTTGGTCGCCATTATGGGTCTCTGTTGGGCCA TTGTTTCCTATTCGGTTTGGACGCGACGCCAGGGTTTGCCCTTGCGCAGCGAACCCTATTCAACGGCTGCTGGATGTCTA CTGATTGCTTGGGCTTGGTATAAAAGTTGGGTGATGCCTGACTACGATCCTTTTGTGCGGATTCAGCCTTTTCTCTTTTG CTTGGGGTTGGGGCTATTGGCCTCCAGTGCCAAGCGCTTGGGCACCTATCGCAGAGAGCTGGGGGTTTTGTTGGTCTTAG CCCTACCCGAAGGGATTTTGGCCCAATGGACCGATCAAATCATCAACATTAGTGAAGTGGCAGCCCAATCCACAACGGCA ATGCTCTGGTACGTAGGGGTGGAGGTGAAGCGCCAGGGGGTGTTTGTGCTCCTGCCTGGAGGCGGCATTGAGGTCTATCG AGGCTGCTCGGGGCTTAAGGCGATGCTGGAACTCCTGAGACTATCCCTTATCTTTCTGGTGATGGTGCCCACTCGCGGGT GGGAGAAGCTGGTGGTGCCTTGTGTGGGCGTGGGCTTAGCCTATGGGGTGAATGTGATTCGCTTAAGCGTGATGACCCTG TTGGCCGCATCCGACTATCAAGAGGCTTTTCACTATTGGCATGAAGGGGAAGGATCCAATATCTTTCCCGTGTTAGCCAT GCTGATCTTTGCCGGCTTTTGTGTTTTCCTTTTACAGCGCAAGGATACGGCTCAAGCAAACCGTTCCCCTCTCCCGCCAG CGACACTGCCTCGATGGCGATTGCTGACCGTTGCATCCATGCTAGCGGGCACGTTAGCGATCCAAGCCGGAATTCTGTGG AAAGCACTGACTCTGGATCGCCAACCCTTTCTATTTCCCCAACAGGTGCCCCTGAGGCAGGCAACCCTAAATCGCAGTCA GTCCCGTCCAGGGCAAAAGGGCAATGCCTACTCCGAAATCTTGGCTCAGCACCAATATCAATATCAATTTCAAGGCCAAA CGCTTCAAGTTGATATGAGCTATGTAACCGGTACCACGGGAGATTTACTCCGCTTTCTTGAGAGTTATCCCATTGCGGAT CAAGTCCTCAAGCCACTGCCTAAACAACAGGTACGTCAGCAAGGCGCCCACTACTATGCCGTCTATACCTATGGAGATCG AGCGTACTTGAGTGCCTGTTTGGATCCAGGAGGATTCGCCACGGTTGAAGAAGGGCATTTTATCCACAATTGGAATAGCC ATTGGTATCTGCTAGGCCGAGACTATATTGACGATCGCTGTCTTTGGACGCATCTGTCGATGCCCTTGAATCAGCAGCCC CCTCAGCAAGTTTTCTCTATTTTGGAATCAAATTGGTTATCCTGGCATGAATGGTGGCGAAATCGCATGCCTAACCTGAG TCTTTAG
Upstream 100 bases:
>100_bases ATGGATTGATAGGGAAATTCTCCCCAGTCGGGTCAGATGTGTTTATTATTAACTCTGAATTGGCTGGGAATGACGCATCC TCCTCTCTGTCACTGTCCTT
Downstream 100 bases:
>100_bases CAAGTGAGGTGGCTTATCTGTCCTGTACTGTACGAGAACTGATTATCCATGGCAAAACAACAACCTGCTGCATCGACGTC TGCACCGCCCAGTAAGAATC
Product: eight transmembrane protein EpsH
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MNPFSLWQRYQLAQRPELWLGAIAVGLALLNLSLAWIHTRNADLVAIMGLCWAIVSYSVWTRRQGLPLRSEPYSTAAGCL LIAWAWYKSWVMPDYDPFVRIQPFLFCLGLGLLASSAKRLGTYRRELGVLLVLALPEGILAQWTDQIINISEVAAQSTTA MLWYVGVEVKRQGVFVLLPGGGIEVYRGCSGLKAMLELLRLSLIFLVMVPTRGWEKLVVPCVGVGLAYGVNVIRLSVMTL LAASDYQEAFHYWHEGEGSNIFPVLAMLIFAGFCVFLLQRKDTAQANRSPLPPATLPRWRLLTVASMLAGTLAIQAGILW KALTLDRQPFLFPQQVPLRQATLNRSQSRPGQKGNAYSEILAQHQYQYQFQGQTLQVDMSYVTGTTGDLLRFLESYPIAD QVLKPLPKQQVRQQGAHYYAVYTYGDRAYLSACLDPGGFATVEEGHFIHNWNSHWYLLGRDYIDDRCLWTHLSMPLNQQP PQQVFSILESNWLSWHEWWRNRMPNLSL
Sequences:
>Translated_508_residues MNPFSLWQRYQLAQRPELWLGAIAVGLALLNLSLAWIHTRNADLVAIMGLCWAIVSYSVWTRRQGLPLRSEPYSTAAGCL LIAWAWYKSWVMPDYDPFVRIQPFLFCLGLGLLASSAKRLGTYRRELGVLLVLALPEGILAQWTDQIINISEVAAQSTTA MLWYVGVEVKRQGVFVLLPGGGIEVYRGCSGLKAMLELLRLSLIFLVMVPTRGWEKLVVPCVGVGLAYGVNVIRLSVMTL LAASDYQEAFHYWHEGEGSNIFPVLAMLIFAGFCVFLLQRKDTAQANRSPLPPATLPRWRLLTVASMLAGTLAIQAGILW KALTLDRQPFLFPQQVPLRQATLNRSQSRPGQKGNAYSEILAQHQYQYQFQGQTLQVDMSYVTGTTGDLLRFLESYPIAD QVLKPLPKQQVRQQGAHYYAVYTYGDRAYLSACLDPGGFATVEEGHFIHNWNSHWYLLGRDYIDDRCLWTHLSMPLNQQP PQQVFSILESNWLSWHEWWRNRMPNLSL >Mature_508_residues MNPFSLWQRYQLAQRPELWLGAIAVGLALLNLSLAWIHTRNADLVAIMGLCWAIVSYSVWTRRQGLPLRSEPYSTAAGCL LIAWAWYKSWVMPDYDPFVRIQPFLFCLGLGLLASSAKRLGTYRRELGVLLVLALPEGILAQWTDQIINISEVAAQSTTA MLWYVGVEVKRQGVFVLLPGGGIEVYRGCSGLKAMLELLRLSLIFLVMVPTRGWEKLVVPCVGVGLAYGVNVIRLSVMTL LAASDYQEAFHYWHEGEGSNIFPVLAMLIFAGFCVFLLQRKDTAQANRSPLPPATLPRWRLLTVASMLAGTLAIQAGILW KALTLDRQPFLFPQQVPLRQATLNRSQSRPGQKGNAYSEILAQHQYQYQFQGQTLQVDMSYVTGTTGDLLRFLESYPIAD QVLKPLPKQQVRQQGAHYYAVYTYGDRAYLSACLDPGGFATVEEGHFIHNWNSHWYLLGRDYIDDRCLWTHLSMPLNQQP PQQVFSILESNWLSWHEWWRNRMPNLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
GO:0016021: Eight transmembrane protein EpsH, putative
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57599; Mature: 57599
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFSLWQRYQLAQRPELWLGAIAVGLALLNLSLAWIHTRNADLVAIMGLCWAIVSYSVW CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH TRRQGLPLRSEPYSTAAGCLLIAWAWYKSWVMPDYDPFVRIQPFLFCLGLGLLASSAKRL HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GTYRRELGVLLVLALPEGILAQWTDQIINISEVAAQSTTAMLWYVGVEVKRQGVFVLLPG HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCEEEEECC GGIEVYRGCSGLKAMLELLRLSLIFLVMVPTRGWEKLVVPCVGVGLAYGVNVIRLSVMTL CCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAASDYQEAFHYWHEGEGSNIFPVLAMLIFAGFCVFLLQRKDTAQANRSPLPPATLPRWR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHH LLTVASMLAGTLAIQAGILWKALTLDRQPFLFPQQVPLRQATLNRSQSRPGQKGNAYSEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCHHHHH LAQHQYQYQFQGQTLQVDMSYVTGTTGDLLRFLESYPIADQVLKPLPKQQVRQQGAHYYA HHHHHHEEEECCCEEEEEEHHHCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCEEEE VYTYGDRAYLSACLDPGGFATVEEGHFIHNWNSHWYLLGRDYIDDRCLWTHLSMPLNQQP EEEECCHHHHHHHCCCCCCEEEECCCEEECCCCEEEEEECCCCCCCCEEHCCCCCCCCCC PQQVFSILESNWLSWHEWWRNRMPNLSL HHHHHHHHHHCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MNPFSLWQRYQLAQRPELWLGAIAVGLALLNLSLAWIHTRNADLVAIMGLCWAIVSYSVW CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH TRRQGLPLRSEPYSTAAGCLLIAWAWYKSWVMPDYDPFVRIQPFLFCLGLGLLASSAKRL HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GTYRRELGVLLVLALPEGILAQWTDQIINISEVAAQSTTAMLWYVGVEVKRQGVFVLLPG HHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCEEEEECC GGIEVYRGCSGLKAMLELLRLSLIFLVMVPTRGWEKLVVPCVGVGLAYGVNVIRLSVMTL CCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAASDYQEAFHYWHEGEGSNIFPVLAMLIFAGFCVFLLQRKDTAQANRSPLPPATLPRWR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHH LLTVASMLAGTLAIQAGILWKALTLDRQPFLFPQQVPLRQATLNRSQSRPGQKGNAYSEI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCHHHHH LAQHQYQYQFQGQTLQVDMSYVTGTTGDLLRFLESYPIADQVLKPLPKQQVRQQGAHYYA HHHHHHEEEECCCEEEEEEHHHCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCEEEE VYTYGDRAYLSACLDPGGFATVEEGHFIHNWNSHWYLLGRDYIDDRCLWTHLSMPLNQQP EEEECCHHHHHHHCCCCCCEEEECCCEEECCCCEEEEEECCCCCCCCEEHCCCCCCCCCC PQQVFSILESNWLSWHEWWRNRMPNLSL HHHHHHHHHHCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA