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The map label for this gene is yebA [C]

Identifier: 158337255

GI number: 158337255

Start: 4168147

End: 4168848

Strand: Direct

Name: yebA [C]

Synonym: AM1_4132

Alternate gene names: 158337255

Gene position: 4168147-4168848 (Clockwise)

Preceding gene: 158337252

Following gene: 158337256

Centisome position: 64.09

GC content: 52.99

Gene sequence:

>702_bases
GTGTTAACCGCTAGTACGCTGCTCCCTAGCTTGCCCAAAGTCATGGCTCAACTACCAGAAGTGACCGATCAGCGTCGCCA
CAAGGAGCCGCTATTTTCCCATAATGATATTGGCGGTGGAGAACCCGCCACAGGTGGCTCTCGGTTTACCCCTTCATCCT
CCGAAATTTACTATCCAGCCTTTGTGGATGCACCATTGGCTAAGCAAGCTTCCGTAGACTCCCCCCTCAAAGGATTTTGT
CATCCCCTGAATGGTCAGGGTTGGTTGAGTCAGGGGATTCGGGGCAGAACCCACCGAGGCCGGATGGAATATGCCTATGA
TTTAGCCACCAGTATCGGCACCCCGGTCTATGCCATGCGGGCGGGGAAGGTGATTGCCGTTCAGGATAAATACCCCGATA
CCGGGGGCGGCAAGGAAAATATTTCTCGCTTCAATTATGTTTGGATTGAGCATGATGAAGGGTATCGCTCGGTCTATGTG
CATCTGCAGCAAGGCTTCCGCAGCAAAGTCTCCATCAAGTCAGGGGACCGTGTGAAGGCAGGACAGCTGATTGGCTATAG
CGGTAATTCCGGCTGGAGTACGGGACCGCACCTCCATGTCGAAGTGCAGAAGCCCCATAAGAAACGTAAGTTTACAAAAA
CAGTCCCCTTTAAGATTGCAGGGGCTTGTAATACTAGCCCCCTCGCTCGAACGGCCCAATAG

Upstream 100 bases:

>100_bases
AAGACTGGGCGAAATTCTGGTTCAGCAGGGAGTGGTTACTCCCAAGCAAGTCCGCCAAGCTCTAAATGAGCAACGTTGGC
GCAATGTGATTGCCACCTGC

Downstream 100 bases:

>100_bases
ATGGATTGATAGGGAAATTCTCCCCAGTCGGGTCAGATGTGTTTATTATTAACTCTGAATTGGCTGGGAATGACGCATCC
TCCTCTCTGTCACTGTCCTT

Product: peptidase M23 domain-containing protein

Products: NA

Alternate protein names: Staphylolytic enzyme ALE-1 [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLTASTLLPSLPKVMAQLPEVTDQRRHKEPLFSHNDIGGGEPATGGSRFTPSSSEIYYPAFVDAPLAKQASVDSPLKGFC
HPLNGQGWLSQGIRGRTHRGRMEYAYDLATSIGTPVYAMRAGKVIAVQDKYPDTGGGKENISRFNYVWIEHDEGYRSVYV
HLQQGFRSKVSIKSGDRVKAGQLIGYSGNSGWSTGPHLHVEVQKPHKKRKFTKTVPFKIAGACNTSPLARTAQ

Sequences:

>Translated_233_residues
MLTASTLLPSLPKVMAQLPEVTDQRRHKEPLFSHNDIGGGEPATGGSRFTPSSSEIYYPAFVDAPLAKQASVDSPLKGFC
HPLNGQGWLSQGIRGRTHRGRMEYAYDLATSIGTPVYAMRAGKVIAVQDKYPDTGGGKENISRFNYVWIEHDEGYRSVYV
HLQQGFRSKVSIKSGDRVKAGQLIGYSGNSGWSTGPHLHVEVQKPHKKRKFTKTVPFKIAGACNTSPLARTAQ
>Mature_233_residues
MLTASTLLPSLPKVMAQLPEVTDQRRHKEPLFSHNDIGGGEPATGGSRFTPSSSEIYYPAFVDAPLAKQASVDSPLKGFC
HPLNGQGWLSQGIRGRTHRGRMEYAYDLATSIGTPVYAMRAGKVIAVQDKYPDTGGGKENISRFNYVWIEHDEGYRSVYV
HLQQGFRSKVSIKSGDRVKAGQLIGYSGNSGWSTGPHLHVEVQKPHKKRKFTKTVPFKIAGACNTSPLARTAQ

Specific function: Lyses staphylococcal cells by hydrolyzing the polyglycine interpeptide bridges of the peptidoglycan [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=143, Percent_Identity=34.2657342657343, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR003646
- InterPro:   IPR013667 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF08460 SH3_5 [H]

EC number: =3.4.24.75 [H]

Molecular weight: Translated: 25542; Mature: 25542

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTASTLLPSLPKVMAQLPEVTDQRRHKEPLFSHNDIGGGEPATGGSRFTPSSSEIYYPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
FVDAPLAKQASVDSPLKGFCHPLNGQGWLSQGIRGRTHRGRMEYAYDLATSIGTPVYAMR
ECCCCCCHHCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
AGKVIAVQDKYPDTGGGKENISRFNYVWIEHDEGYRSVYVHLQQGFRSKVSIKSGDRVKA
CCCEEEEECCCCCCCCCHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCEEC
GQLIGYSGNSGWSTGPHLHVEVQKPHKKRKFTKTVPFKIAGACNTSPLARTAQ
CEEEEECCCCCCCCCCEEEEEECCCCCHHCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLTASTLLPSLPKVMAQLPEVTDQRRHKEPLFSHNDIGGGEPATGGSRFTPSSSEIYYPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
FVDAPLAKQASVDSPLKGFCHPLNGQGWLSQGIRGRTHRGRMEYAYDLATSIGTPVYAMR
ECCCCCCHHCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEE
AGKVIAVQDKYPDTGGGKENISRFNYVWIEHDEGYRSVYVHLQQGFRSKVSIKSGDRVKA
CCCEEEEECCCCCCCCCHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCEEC
GQLIGYSGNSGWSTGPHLHVEVQKPHKKRKFTKTVPFKIAGACNTSPLARTAQ
CEEEEECCCCCCCCCCEEEEEECCCCCHHCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9023202 [H]