| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is cheW [C]
Identifier: 158337179
GI number: 158337179
Start: 4104653
End: 4105180
Strand: Reverse
Name: cheW [C]
Synonym: AM1_4056
Alternate gene names: 158337179
Gene position: 4105180-4104653 (Counterclockwise)
Preceding gene: 158337180
Following gene: 158337178
Centisome position: 63.12
GC content: 44.89
Gene sequence:
>528_bases ATGGTCAGTCACCAAGATATTGTTGCAGATACAGATACTAATCAGCTTTCCAATCTCCAGGAATTACAAAATCCTGAAGG AGACTTATTCTTAAGATTCTTTATTGAGTCAGGCCAAGAATTTGCATTACCAGCCCAAGGTATTCGGGAAGTACTAGCAT TAGCCCCCGATCAAATTACGCCGATTCCCAATGTCTCTCCTGTGCTGATGGGTGTCTTAAATCTGAGAGGTCAGGTTGTT TGGGTCACAGATATTGGTCAGTTCTTAGGCCATCCTAAACCCTTGGATACAGATTGCCAGGAAATATCGATCATTGCGAT CGAATCCCAAGAAATCACGGTGGGTCTGGCAGTTGACAAAGTGATGGATATGGATTGGCTTGATGCTGACAGGCTAAGTC CCTCCCTCAGTGCACCAGACAATATGGCCCCTTTCTTGAAGGGAGAATGGGTACTCGGTGACTCCGAACAATATTTACGA TTATTGGATCCAGAAGCAATTTTGAGATCAGCCCGGTGGGCGACTTAA
Upstream 100 bases:
>100_bases CTGGGGGATGAAACAAGGGGCAGATGCTTATCTGACCAAGCCGATACAACCAAGAGAATTACTAGTCATAGTTAGGCAAT TACTAGAAGGTTAGATCCTT
Downstream 100 bases:
>100_bases TTCCAAGAAGGGGGAAGGGGAATGGCTAAACTTGGCAAGTCTAGAGGTTAACCTTCAAAATCATTCCTTAAGTTTTGTTC AATCTTAGTGGTTTAATTCA
Product: CheW domain-containing protein
Products: NA
Alternate protein names: CheW Domain-Containing Protein; Chemotaxis Protein; CheW-Like Protein; Chemotaxis Protein CheW
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MVSHQDIVADTDTNQLSNLQELQNPEGDLFLRFFIESGQEFALPAQGIREVLALAPDQITPIPNVSPVLMGVLNLRGQVV WVTDIGQFLGHPKPLDTDCQEISIIAIESQEITVGLAVDKVMDMDWLDADRLSPSLSAPDNMAPFLKGEWVLGDSEQYLR LLDPEAILRSARWAT
Sequences:
>Translated_175_residues MVSHQDIVADTDTNQLSNLQELQNPEGDLFLRFFIESGQEFALPAQGIREVLALAPDQITPIPNVSPVLMGVLNLRGQVV WVTDIGQFLGHPKPLDTDCQEISIIAIESQEITVGLAVDKVMDMDWLDADRLSPSLSAPDNMAPFLKGEWVLGDSEQYLR LLDPEAILRSARWAT >Mature_175_residues MVSHQDIVADTDTNQLSNLQELQNPEGDLFLRFFIESGQEFALPAQGIREVLALAPDQITPIPNVSPVLMGVLNLRGQVV WVTDIGQFLGHPKPLDTDCQEISIIAIESQEITVGLAVDKVMDMDWLDADRLSPSLSAPDNMAPFLKGEWVLGDSEQYLR LLDPEAILRSARWAT
Specific function: Involved In The Transmission Of Sensory Signals From The Chemoreceptors To The Flagellar Motors. It Physically Bridges Chea To The Mcps (Methyl-Accepting Chemotaxis Proteins) To Allow Regulated Phosphotransfer To Chey And Cheb. [C]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19379; Mature: 19379
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSHQDIVADTDTNQLSNLQELQNPEGDLFLRFFIESGQEFALPAQGIREVLALAPDQIT CCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC PIPNVSPVLMGVLNLRGQVVWVTDIGQFLGHPKPLDTDCQEISIIAIESQEITVGLAVDK CCCCCHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEHHH VMDMDWLDADRLSPSLSAPDNMAPFLKGEWVLGDSEQYLRLLDPEAILRSARWAT HHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MVSHQDIVADTDTNQLSNLQELQNPEGDLFLRFFIESGQEFALPAQGIREVLALAPDQIT CCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC PIPNVSPVLMGVLNLRGQVVWVTDIGQFLGHPKPLDTDCQEISIIAIESQEITVGLAVDK CCCCCHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEHHH VMDMDWLDADRLSPSLSAPDNMAPFLKGEWVLGDSEQYLRLLDPEAILRSARWAT HHCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA