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The map label for this gene is tsr [C]

Identifier: 158337178

GI number: 158337178

Start: 4101937

End: 4104459

Strand: Reverse

Name: tsr [C]

Synonym: AM1_4055

Alternate gene names: 158337178

Gene position: 4104459-4101937 (Counterclockwise)

Preceding gene: 158337179

Following gene: 158337177

Centisome position: 63.11

GC content: 46.61

Gene sequence:

>2523_bases
ATGTCATTAAGTACTCGATATACTCAGGACTATCAACAAGCAGTGAGTGACTATATGAAAGGTCACTACCAAGAAGCTGC
CGAAACGACAGACCAGCTAGTAAAAGAGTATCCTGACGATCCAAATCTGCGATTACTCCGAGGACATATATATAGTTGTC
TTCAAAAATACGAAATTGCTAACCAACAATATAAGTCTGTATTAGAGTTGACTCATGATCCGGAGTTGCTTGATTGTGCT
CGCAACAGCTTGGCGGATTCAACTCGATACCTTGAATCGGGCTATGGCTATTCCGAGCCGATGCCCTCTATCGATAACAA
CAGTGCTGCTTTGACCATGACGAATGGGAATGAGCCGCAATTGGGTGAAGCGGGAGTTGCCCAGCCCTCATCCTCACTGC
AGACAACGTCTGATGGTGAGTCTTCAACTGCGGATGACAACCCATTTGCAGTCAATTCAAACCCCTTTGATGATTATGTG
TCCGCTCCTCTGGTTGCTGGGAATACTAACAGACAGCCCTTGGTTTCGGATAGTTTTGCTGATGGAGAAGACGATACGTT
ACTCATGAACAAGAACCATTCAACATCCGATTCAGAAAGTTCCGATACTCGGCCGTCCGGTATTTTCAGCGATTCCGAAA
GCGATGCTATTCAAAGTGAATTTACTGATATTAGTGGTGTAGACAATACCATACAGACTTCTGATGCTGATGCCTGGGAT
GAACCCTTTGATTTGGCAGGAGAGAATACAATCCAATCTGCTGACTTAGATTTCTCAGATTCCATCGATCAAACTGAATT
TCCCATGTCTGGGATTGATTTATCTGAAGAACTATCCATGGATGGTTTAGAAGGGGATGCAGAAATAGATTCCTTTGATC
CAGCAACCGAGTTCGATCTGGATCCAAGTTTGCTGAACTTGGCAGAAGATGAACAGGATTTGATTGGAGATACCGGATTA
ATCAATGTAGCGGAGAATGCACAGGCGCTAGCCATTGATGATCTCCCTCCTTCATCGGACTTGGCCGCGTCATCACAGTC
AGGATTTTTAGGGGATTCTCAAGATGGCAGCGCTTTCTTCTCTGATGGCCAAGGGGCTGCCCTATCCAAAAAACCAGGGG
GAATCTTAGCTCCTTTTACCAATGCCTCATTGCAGCAAAAGCAAATTATTATGTCGACCACTGCGGGAGTCGTTTCGGCG
CTGGCAGTGGTCGGGGCTGGCCAACTGACCTCTCAATCTACGGCCACGACAGGAGCAGGTGCACTAGCAGCCGGTATGGC
CGGTGGTGTGACGACCCTAGCCCTTGGACAAATTATGACTCGGCAAATCAAGTCTTCAACTAATGATTTGCAAACTCAAT
TGACTGCCGTAGCCCAAGGTGACTGGAGTGTTCGGGCTACTGAGTTTTCTAAAGATGAATTTGGTCAATTAGCTACTAGC
TTTAACCAAATGACTCGTTTTATTGAGTCAACAACAGCTGAAGTGCAGCGCAAAGCAGAAGAACAGGAAAAGGCTAAAGA
AGACTTGCAGCGACAAGTGATTCGTCTACTGGATGATGTAGAAGGGGCCGCGCGGGGTGACCTGACAGTTCAAGCCGAAG
TCACGGCTGATATTTTAGGCGCAGTTGCTGACTCTTTTAACCTCACCATTTATAACCTCCAAAAGATTGTTAAACAGGTT
AAGGTAGCTGCCCAGGAAGTGAATAAAGGAGCAGCTGAAAACGAAGAATTTGCCCGGGGCTTATCTTCTGATGCGTTACG
ACAGGCTGAAGAGCTGGCCGTCTCACTCAATTCAGTGCAGATGATGACTTCATCTATTCAACAGGTGGCAGAAAGTGCGC
GTTCTGCAGACCAGGTGGCTCAAAAAGCAACTGAGGCTGCTCTAAAGGGTGGAGAATCTGTAGAAAGTACAGTAGCCGGT
ATTCTTCAAATTCGAGAAACAGTGGCTGAAAGTACCCGAAAAGTGAAGCGCCTTGCTGAATCTTCCCAAGAAATTTCCAA
AATTGTCGGTTTAATTTCACAAATTGCGTCACGCACGAACCTACTGGCCCTGAACGCTAGTATTGAGGCCGCTCGGGCCG
GTGAATCGGGGCGTGGTTTTGCGGTTGTTGCGGATGAAGTTCGTCAACTAGCCGATCGGGCGGCCAAGTCATCTAAAGAA
ATTGAGCAAATTGTTTTACAAATTCAAGGTGAAACAAGCTCTGTGATGATGGCCATGGAAGAAGGCACCCAACAAGTTAT
TGAAGGAACCCAGCGGGCTGAACAAGCCAAGCGTTCGTTGGATGACATTATTCAAGTCTCTTCCCAAATTAACCAGTTGG
TGGGTTCGATTACCAAAGCGACTGCTGAGCAAACGGAAACATCACGCTATGTATCTCAAGTTATGCAGTCCGTTGAATTA
ACCGCCCAAGAAACTTCTCAAGAAGCACAACGGGTGTCCGACTCCCTGCGAAATATGGTGAGTGTTGCCAGCGAACTTCA
ATCTTCTGTGGAGCGATTCAGAGTGGAAGGCACTGAATTCTAA

Upstream 100 bases:

>100_bases
TAATTCATCTCAGATAGTTTTTTCAACATTCTCTATCACACCCCCGAAAATTATTCGCTTCAGTTAGCATTTCGACTCAT
CCAGTGGCAGGAGCAGACAG

Downstream 100 bases:

>100_bases
AGCTTCATCGCCTTATTTCGACATCATCAATTTGACTTATCGTTTTACAGCATCCTAAGGGAGATGGTAATGCAGCCAGA
ACAACAGCGGATTATGGTCT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 840; Mature: 839

Protein sequence:

>840_residues
MSLSTRYTQDYQQAVSDYMKGHYQEAAETTDQLVKEYPDDPNLRLLRGHIYSCLQKYEIANQQYKSVLELTHDPELLDCA
RNSLADSTRYLESGYGYSEPMPSIDNNSAALTMTNGNEPQLGEAGVAQPSSSLQTTSDGESSTADDNPFAVNSNPFDDYV
SAPLVAGNTNRQPLVSDSFADGEDDTLLMNKNHSTSDSESSDTRPSGIFSDSESDAIQSEFTDISGVDNTIQTSDADAWD
EPFDLAGENTIQSADLDFSDSIDQTEFPMSGIDLSEELSMDGLEGDAEIDSFDPATEFDLDPSLLNLAEDEQDLIGDTGL
INVAENAQALAIDDLPPSSDLAASSQSGFLGDSQDGSAFFSDGQGAALSKKPGGILAPFTNASLQQKQIIMSTTAGVVSA
LAVVGAGQLTSQSTATTGAGALAAGMAGGVTTLALGQIMTRQIKSSTNDLQTQLTAVAQGDWSVRATEFSKDEFGQLATS
FNQMTRFIESTTAEVQRKAEEQEKAKEDLQRQVIRLLDDVEGAARGDLTVQAEVTADILGAVADSFNLTIYNLQKIVKQV
KVAAQEVNKGAAENEEFARGLSSDALRQAEELAVSLNSVQMMTSSIQQVAESARSADQVAQKATEAALKGGESVESTVAG
ILQIRETVAESTRKVKRLAESSQEISKIVGLISQIASRTNLLALNASIEAARAGESGRGFAVVADEVRQLADRAAKSSKE
IEQIVLQIQGETSSVMMAMEEGTQQVIEGTQRAEQAKRSLDDIIQVSSQINQLVGSITKATAEQTETSRYVSQVMQSVEL
TAQETSQEAQRVSDSLRNMVSVASELQSSVERFRVEGTEF

Sequences:

>Translated_840_residues
MSLSTRYTQDYQQAVSDYMKGHYQEAAETTDQLVKEYPDDPNLRLLRGHIYSCLQKYEIANQQYKSVLELTHDPELLDCA
RNSLADSTRYLESGYGYSEPMPSIDNNSAALTMTNGNEPQLGEAGVAQPSSSLQTTSDGESSTADDNPFAVNSNPFDDYV
SAPLVAGNTNRQPLVSDSFADGEDDTLLMNKNHSTSDSESSDTRPSGIFSDSESDAIQSEFTDISGVDNTIQTSDADAWD
EPFDLAGENTIQSADLDFSDSIDQTEFPMSGIDLSEELSMDGLEGDAEIDSFDPATEFDLDPSLLNLAEDEQDLIGDTGL
INVAENAQALAIDDLPPSSDLAASSQSGFLGDSQDGSAFFSDGQGAALSKKPGGILAPFTNASLQQKQIIMSTTAGVVSA
LAVVGAGQLTSQSTATTGAGALAAGMAGGVTTLALGQIMTRQIKSSTNDLQTQLTAVAQGDWSVRATEFSKDEFGQLATS
FNQMTRFIESTTAEVQRKAEEQEKAKEDLQRQVIRLLDDVEGAARGDLTVQAEVTADILGAVADSFNLTIYNLQKIVKQV
KVAAQEVNKGAAENEEFARGLSSDALRQAEELAVSLNSVQMMTSSIQQVAESARSADQVAQKATEAALKGGESVESTVAG
ILQIRETVAESTRKVKRLAESSQEISKIVGLISQIASRTNLLALNASIEAARAGESGRGFAVVADEVRQLADRAAKSSKE
IEQIVLQIQGETSSVMMAMEEGTQQVIEGTQRAEQAKRSLDDIIQVSSQINQLVGSITKATAEQTETSRYVSQVMQSVEL
TAQETSQEAQRVSDSLRNMVSVASELQSSVERFRVEGTEF
>Mature_839_residues
SLSTRYTQDYQQAVSDYMKGHYQEAAETTDQLVKEYPDDPNLRLLRGHIYSCLQKYEIANQQYKSVLELTHDPELLDCAR
NSLADSTRYLESGYGYSEPMPSIDNNSAALTMTNGNEPQLGEAGVAQPSSSLQTTSDGESSTADDNPFAVNSNPFDDYVS
APLVAGNTNRQPLVSDSFADGEDDTLLMNKNHSTSDSESSDTRPSGIFSDSESDAIQSEFTDISGVDNTIQTSDADAWDE
PFDLAGENTIQSADLDFSDSIDQTEFPMSGIDLSEELSMDGLEGDAEIDSFDPATEFDLDPSLLNLAEDEQDLIGDTGLI
NVAENAQALAIDDLPPSSDLAASSQSGFLGDSQDGSAFFSDGQGAALSKKPGGILAPFTNASLQQKQIIMSTTAGVVSAL
AVVGAGQLTSQSTATTGAGALAAGMAGGVTTLALGQIMTRQIKSSTNDLQTQLTAVAQGDWSVRATEFSKDEFGQLATSF
NQMTRFIESTTAEVQRKAEEQEKAKEDLQRQVIRLLDDVEGAARGDLTVQAEVTADILGAVADSFNLTIYNLQKIVKQVK
VAAQEVNKGAAENEEFARGLSSDALRQAEELAVSLNSVQMMTSSIQQVAESARSADQVAQKATEAALKGGESVESTVAGI
LQIRETVAESTRKVKRLAESSQEISKIVGLISQIASRTNLLALNASIEAARAGESGRGFAVVADEVRQLADRAAKSSKEI
EQIVLQIQGETSSVMMAMEEGTQQVIEGTQRAEQAKRSLDDIIQVSSQINQLVGSITKATAEQTETSRYVSQVMQSVELT
AQETSQEAQRVSDSLRNMVSVASELQSSVERFRVEGTEF

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=281, Percent_Identity=33.8078291814947, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1788194, Length=290, Percent_Identity=34.4827586206897, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1787690, Length=336, Percent_Identity=31.547619047619, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI1788195, Length=274, Percent_Identity=32.8467153284672, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1789453, Length=232, Percent_Identity=31.4655172413793, Blast_Score=110, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003018
- InterPro:   IPR003660
- InterPro:   IPR016132 [H]

Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 89852; Mature: 89721

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS50885 HAMP ; PS50293 TPR_REGION ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSTRYTQDYQQAVSDYMKGHYQEAAETTDQLVKEYPDDPNLRLLRGHIYSCLQKYEIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
NQQYKSVLELTHDPELLDCARNSLADSTRYLESGYGYSEPMPSIDNNSAALTMTNGNEPQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCC
LGEAGVAQPSSSLQTTSDGESSTADDNPFAVNSNPFDDYVSAPLVAGNTNRQPLVSDSFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCCCEEECCCCCCCCCCCCCC
DGEDDTLLMNKNHSTSDSESSDTRPSGIFSDSESDAIQSEFTDISGVDNTIQTSDADAWD
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
EPFDLAGENTIQSADLDFSDSIDQTEFPMSGIDLSEELSMDGLEGDAEIDSFDPATEFDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
DPSLLNLAEDEQDLIGDTGLINVAENAQALAIDDLPPSSDLAASSQSGFLGDSQDGSAFF
CHHHHHHCCCHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
SDGQGAALSKKPGGILAPFTNASLQQKQIIMSTTAGVVSALAVVGAGQLTSQSTATTGAG
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
ALAAGMAGGVTTLALGQIMTRQIKSSTNDLQTQLTAVAQGDWSVRATEFSKDEFGQLATS
HHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
FNQMTRFIESTTAEVQRKAEEQEKAKEDLQRQVIRLLDDVEGAARGDLTVQAEVTADILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
AVADSFNLTIYNLQKIVKQVKVAAQEVNKGAAENEEFARGLSSDALRQAEELAVSLNSVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH
MMTSSIQQVAESARSADQVAQKATEAALKGGESVESTVAGILQIRETVAESTRKVKRLAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQEISKIVGLISQIASRTNLLALNASIEAARAGESGRGFAVVADEVRQLADRAAKSSKE
HHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHH
IEQIVLQIQGETSSVMMAMEEGTQQVIEGTQRAEQAKRSLDDIIQVSSQINQLVGSITKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEQTETSRYVSQVMQSVELTAQETSQEAQRVSDSLRNMVSVASELQSSVERFRVEGTEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLSTRYTQDYQQAVSDYMKGHYQEAAETTDQLVKEYPDDPNLRLLRGHIYSCLQKYEIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
NQQYKSVLELTHDPELLDCARNSLADSTRYLESGYGYSEPMPSIDNNSAALTMTNGNEPQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCC
LGEAGVAQPSSSLQTTSDGESSTADDNPFAVNSNPFDDYVSAPLVAGNTNRQPLVSDSFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCCCEEECCCCCCCCCCCCCC
DGEDDTLLMNKNHSTSDSESSDTRPSGIFSDSESDAIQSEFTDISGVDNTIQTSDADAWD
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
EPFDLAGENTIQSADLDFSDSIDQTEFPMSGIDLSEELSMDGLEGDAEIDSFDPATEFDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
DPSLLNLAEDEQDLIGDTGLINVAENAQALAIDDLPPSSDLAASSQSGFLGDSQDGSAFF
CHHHHHHCCCHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE
SDGQGAALSKKPGGILAPFTNASLQQKQIIMSTTAGVVSALAVVGAGQLTSQSTATTGAG
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
ALAAGMAGGVTTLALGQIMTRQIKSSTNDLQTQLTAVAQGDWSVRATEFSKDEFGQLATS
HHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
FNQMTRFIESTTAEVQRKAEEQEKAKEDLQRQVIRLLDDVEGAARGDLTVQAEVTADILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
AVADSFNLTIYNLQKIVKQVKVAAQEVNKGAAENEEFARGLSSDALRQAEELAVSLNSVQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH
MMTSSIQQVAESARSADQVAQKATEAALKGGESVESTVAGILQIRETVAESTRKVKRLAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQEISKIVGLISQIASRTNLLALNASIEAARAGESGRGFAVVADEVRQLADRAAKSSKE
HHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHH
IEQIVLQIQGETSSVMMAMEEGTQQVIEGTQRAEQAKRSLDDIIQVSSQINQLVGSITKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEQTETSRYVSQVMQSVELTAQETSQEAQRVSDSLRNMVSVASELQSSVERFRVEGTEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]