Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337090

Identifier: 158337090

GI number: 158337090

Start: 4012899

End: 4013345

Strand: Reverse

Name: 158337090

Synonym: AM1_3963

Alternate gene names: NA

Gene position: 4013345-4012899 (Counterclockwise)

Preceding gene: 158337092

Following gene: 158337089

Centisome position: 61.71

GC content: 48.55

Gene sequence:

>447_bases
ATGCGGCAGGTCAACTTTACTCTGATTTTCGTGATTTGTCTGGCTGTTGTTTTGTTTGCCATTGAGAATACACAGCTAGT
CAGCATCAAAGTCGTGAATGGTGTCGAGTTAACGGCTCCCTTGTCCATTGAATTGATTATTACCCTAGGGATTGGCGCTG
TCCTAGCCTGGGTCTTTAGCGTATGGACCACTGTTCAAGAGTTATTCGTTACTCGAGAAGCCTTGCAAGCACGAGAGATT
GAAATTGAATCCTTACAAACCGATATCGAACGCTACAAAGCTGAACTCGAAGAACAACGCTTACTTCTGCCCAGTCAAGC
CACGGTCACCAGCGATGCCGTCTCTGTAGCTACCTTGTCGGAACCTACCACCAAAACCGTTGTTCCTCGGACCGAGGGCG
ACTCAGCCATCCTTACCCCTCCACCGTCTGAGCTTGTTCCAGACTAA

Upstream 100 bases:

>100_bases
AAAAATATTCAAAATTTGTCCTTTCTCAAGCCAAATCTCAATCCCTCAAAAGCTTAGTCTCGCTAGAATTGCAGAGTTAT
ATCACCTTGGGAGTTATCGA

Downstream 100 bases:

>100_bases
GCCGCTATGAGCAGTTCCTTTGCCCACAATGCCATTTCCATGTTGATCGACTTAGCCCAACGGGGTGAAATCGATCCATG
GGATGTTCAAGTCATCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRQVNFTLIFVICLAVVLFAIENTQLVSIKVVNGVELTAPLSIELIITLGIGAVLAWVFSVWTTVQELFVTREALQAREI
EIESLQTDIERYKAELEEQRLLLPSQATVTSDAVSVATLSEPTTKTVVPRTEGDSAILTPPPSELVPD

Sequences:

>Translated_148_residues
MRQVNFTLIFVICLAVVLFAIENTQLVSIKVVNGVELTAPLSIELIITLGIGAVLAWVFSVWTTVQELFVTREALQAREI
EIESLQTDIERYKAELEEQRLLLPSQATVTSDAVSVATLSEPTTKTVVPRTEGDSAILTPPPSELVPD
>Mature_148_residues
MRQVNFTLIFVICLAVVLFAIENTQLVSIKVVNGVELTAPLSIELIITLGIGAVLAWVFSVWTTVQELFVTREALQAREI
EIESLQTDIERYKAELEEQRLLLPSQATVTSDAVSVATLSEPTTKTVVPRTEGDSAILTPPPSELVPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16220; Mature: 16220

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQVNFTLIFVICLAVVLFAIENTQLVSIKVVNGVELTAPLSIELIITLGIGAVLAWVFS
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCEEEEEEEHHHHHHHHHHHH
VWTTVQELFVTREALQAREIEIESLQTDIERYKAELEEQRLLLPSQATVTSDAVSVATLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
EPTTKTVVPRTEGDSAILTPPPSELVPD
CCCCCEEEECCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRQVNFTLIFVICLAVVLFAIENTQLVSIKVVNGVELTAPLSIELIITLGIGAVLAWVFS
CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCEEEEEEEHHHHHHHHHHHH
VWTTVQELFVTREALQAREIEIESLQTDIERYKAELEEQRLLLPSQATVTSDAVSVATLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC
EPTTKTVVPRTEGDSAILTPPPSELVPD
CCCCCEEEECCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA