Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337076

Identifier: 158337076

GI number: 158337076

Start: 3999226

End: 3999423

Strand: Reverse

Name: 158337076

Synonym: AM1_3949

Alternate gene names: NA

Gene position: 3999423-3999226 (Counterclockwise)

Preceding gene: 158337079

Following gene: 158337074

Centisome position: 61.49

GC content: 43.94

Gene sequence:

>198_bases
TTGTCTAGCGATTTTTGCATTGAAGCAGCCCCTGATCAATCTGGTTTCTTTATGACGTCTTGTAAGGCAGGCGTACGAAG
AGGAGATGTGATTCACATTTCCGAGGCAGGTCAACGGTCAGAGTATCGAATTGATGAAATTGACTATTACAGCGATCCAT
CTGATATGTGGATTGCCAAGCTGAGAACGGTGTCATAA

Upstream 100 bases:

>100_bases
AATGGTATTCACGCAATTCCACCAGCCCATCTCATCTCCACGTTGGAATGTACCAGTTCGCTCACGCAAGAGCAGAGTTC
ATCGCTACGAGCACTCTGCC

Downstream 100 bases:

>100_bases
CACTTGAGCTTAAAGGGCACCTATACGTAACATTCCTTTAAAAATATTTTCGCCATACTCCAATTAAAGAGCCTTGGATT
TCTACCTGTGTTGCTAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSSDFCIEAAPDQSGFFMTSCKAGVRRGDVIHISEAGQRSEYRIDEIDYYSDPSDMWIAKLRTVS

Sequences:

>Translated_65_residues
MSSDFCIEAAPDQSGFFMTSCKAGVRRGDVIHISEAGQRSEYRIDEIDYYSDPSDMWIAKLRTVS
>Mature_64_residues
SSDFCIEAAPDQSGFFMTSCKAGVRRGDVIHISEAGQRSEYRIDEIDYYSDPSDMWIAKLRTVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7341; Mature: 7210

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDFCIEAAPDQSGFFMTSCKAGVRRGDVIHISEAGQRSEYRIDEIDYYSDPSDMWIAK
CCCCCEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
LRTVS
EEECC
>Mature Secondary Structure 
SSDFCIEAAPDQSGFFMTSCKAGVRRGDVIHISEAGQRSEYRIDEIDYYSDPSDMWIAK
CCCCEEEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
LRTVS
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA