Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337038

Identifier: 158337038

GI number: 158337038

Start: 3964583

End: 3965260

Strand: Reverse

Name: 158337038

Synonym: AM1_3911

Alternate gene names: NA

Gene position: 3965260-3964583 (Counterclockwise)

Preceding gene: 158337039

Following gene: 158337037

Centisome position: 60.97

GC content: 47.35

Gene sequence:

>678_bases
ATGACTTATTTTTCTAGAATTCTCTTCACATCTTCTCTCTGCTTAACAGCCACCCTGGCCCAGGTTGCTACCCCCTTAGC
GGCCTCTGCCGACCCAAGTTTATCGACCCCCGGCATCCCTGCTGTCCCCACGGTTTCAGAAGGAGAAAACGCCACTTCCC
CCCAAATCAAACCGGGTATTTCACCCGATCAACCCGTAAAACCCAGAATTCGCTATGAATGCAAAAATGAAGCGGATAAA
TTATCGACTGTTGCCCATACTGAGCGCGGCATGATTGAGCTGATTGTGTGGGAAAGCAACTTTTTTGGTACTACTTGGAC
CCCGGCAAAAAGATGTGAAACTGTAACCCAACGATTTCAGCAATTCTCTGACCAGCGACTACTCAAATTTGTCTCGACGG
GAAGTATGAATAACTACCAAGTTATTTGTATCTCTGAGCAAGCAGGACAATGCCTGGATCAAGGATTATTAATTACCCTA
GAGCCGAAAGATAAACCCACACGGGTATTGCGCCAACTGTTCAACTATCGCACCAGTATTCGCCGAGGCGGTCCCAAAAA
AGAGGTCATTGACTTTGAGCGTTTATTAAACGAAAGAACGCCGGTCGCTGAACCTGAAAGCGCTATCGGCGGCACAGCAG
ACACTCCAATCAGCCCTAATCCTGGCTTAGATAATTAA

Upstream 100 bases:

>100_bases
GTCATCAACAATTTAGCTATCCGGCCTATCCCTGAGGGATCAGCCAACCAAAATTCATGCGGGTGATTTATGCCAGTGAC
AACGACTTCAAGGTATTGAA

Downstream 100 bases:

>100_bases
TCTTCGCTCTGTATTAACGGACGTTTTCTTCTAAAGATTTAAGCCTTGTAGCGGTCAGTCTTTTAGGCCTAAATTATCAA
TTTTTTTCCAGAGAGTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTYFSRILFTSSLCLTATLAQVATPLAASADPSLSTPGIPAVPTVSEGENATSPQIKPGISPDQPVKPRIRYECKNEADK
LSTVAHTERGMIELIVWESNFFGTTWTPAKRCETVTQRFQQFSDQRLLKFVSTGSMNNYQVICISEQAGQCLDQGLLITL
EPKDKPTRVLRQLFNYRTSIRRGGPKKEVIDFERLLNERTPVAEPESAIGGTADTPISPNPGLDN

Sequences:

>Translated_225_residues
MTYFSRILFTSSLCLTATLAQVATPLAASADPSLSTPGIPAVPTVSEGENATSPQIKPGISPDQPVKPRIRYECKNEADK
LSTVAHTERGMIELIVWESNFFGTTWTPAKRCETVTQRFQQFSDQRLLKFVSTGSMNNYQVICISEQAGQCLDQGLLITL
EPKDKPTRVLRQLFNYRTSIRRGGPKKEVIDFERLLNERTPVAEPESAIGGTADTPISPNPGLDN
>Mature_224_residues
TYFSRILFTSSLCLTATLAQVATPLAASADPSLSTPGIPAVPTVSEGENATSPQIKPGISPDQPVKPRIRYECKNEADKL
STVAHTERGMIELIVWESNFFGTTWTPAKRCETVTQRFQQFSDQRLLKFVSTGSMNNYQVICISEQAGQCLDQGLLITLE
PKDKPTRVLRQLFNYRTSIRRGGPKKEVIDFERLLNERTPVAEPESAIGGTADTPISPNPGLDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24788; Mature: 24657

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYFSRILFTSSLCLTATLAQVATPLAASADPSLSTPGIPAVPTVSEGENATSPQIKPGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPDQPVKPRIRYECKNEADKLSTVAHTERGMIELIVWESNFFGTTWTPAKRCETVTQRFQ
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
QFSDQRLLKFVSTGSMNNYQVICISEQAGQCLDQGLLITLEPKDKPTRVLRQLFNYRTSI
HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH
RRGGPKKEVIDFERLLNERTPVAEPESAIGGTADTPISPNPGLDN
HCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYFSRILFTSSLCLTATLAQVATPLAASADPSLSTPGIPAVPTVSEGENATSPQIKPGI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPDQPVKPRIRYECKNEADKLSTVAHTERGMIELIVWESNFFGTTWTPAKRCETVTQRFQ
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
QFSDQRLLKFVSTGSMNNYQVICISEQAGQCLDQGLLITLEPKDKPTRVLRQLFNYRTSI
HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH
RRGGPKKEVIDFERLLNERTPVAEPESAIGGTADTPISPNPGLDN
HCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA