| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337037
Identifier: 158337037
GI number: 158337037
Start: 3963044
End: 3964318
Strand: Reverse
Name: 158337037
Synonym: AM1_3910
Alternate gene names: NA
Gene position: 3964318-3963044 (Counterclockwise)
Preceding gene: 158337038
Following gene: 158337036
Centisome position: 60.95
GC content: 51.53
Gene sequence:
>1275_bases TTGCGCTTATTTGTGGATAAATTTATGCCGTTAAAGCCATACGCTATTTGCCAGCTAAGTCTCCTCTCGATTTCTGTTTG TCTCTCCTTTCCGAGCCCAGTCAGATCAACAGAACTTTCTCTGAAAAATACATACCCTTTTAGCCAGCAAGATTTAACCC TACAAGAGAGCCTGAGGGGACAAACCGTCGCCCCTACTGCTCCTCTCGACGTTGTGCTGGCCCAAGAATCCACAGCAGCC CTGCCAACGGCATTACAGTCGCCTCTGCCTTTTGCCCTTGACACTTCTGCCTCCCCACCAGACGCTCCAGCTGCGGGTTC CGACACGGCTGCTTCCCCTGAATTAACGTTTCCCTTGACAACAGAGGTAACGGAGACACCAAGCGAGCCTCTGCCAAACC ATTCATCCTTTTCTACAGGTGAGTTTTACCCCACGCGTCTACCCACCCCCCAAACGGTCCCACCCTTATTAACCCTGGAC CAAATTGCTCAGGTGCCAGACGGACCCAACCCAGACGAATCGGCAGGTCGTCGGCCTAGTATTCGCACCCAACCCTCTAC TCCCGATGAAGCCCCATTAGATCTACGAGAAGAGTTGCTCACCCCTAAGGTTATATACAGTCCCAGCACGACGATTCTAA CGCCGTCAGCCTATGGCAAATCTTGGCGGCAAGCTTCAGTGGGCTTTGGCTTTCAGCATCGTACTCGATTTACCAATAGT GCCGATGGAGCGATTGGTGTGGGCATTGGCTTAGGGGATGCCCGCAAGTATGTGGGGCTAGATGTGGGCCTCACCCTCAC AGATTTAGATAATTTTGATCGAGGCATTATTAGCTTTAAGCTGCATCGACGACTACCTGATTTATTTGCCGTCGCCGTGG GCGTCAATGATGCCATTAGCTGGGGTCCCGGAGATATTGATGGTCCCAGCCCCTATGGGGTCGTATCCAAAACATTTATT TTCAAAGAAAATACCAAAGACCTGTTTAGCCGCATGTACGTCTCCGCCGGGTTAGGAACAGGACGCTATCGCACCGAGAA TAATGTGTTTACCGATGATGATACCCCTGGCGTTTTTGGCAGTGTCGCCCTGCGCATTGCTGATCCAGTGAATGCGATCG CAGAATGGTCTGGTCAAGATCTATCCTTGGGCTTTTCTCTACGACCATTTCGCGAAATTCCGCTGATCATTACCCCAGCC ATCACGGATGTAACGGGTACCGCCGGAGACGGGGTGCGCTTTATTTTTGGCGTCGGTTACGCCATTACGTTTTAG
Upstream 100 bases:
>100_bases AGATATTGATATTTTCTGAATATCAGCTTCAATAGCTTGACAGTATGATTCAATCTAGGGTGACTAATTTCCTGAGTCTG TACAAGAGGACTGTTATCTA
Downstream 100 bases:
>100_bases AGCATTCCGTTGATTGACCTGATCGATAGCCCACTTTGATAGAAAAATCTCTTGTGACCATGACCCAACTATTTAAAACC CCTTTTCGCCTCATTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRLFVDKFMPLKPYAICQLSLLSISVCLSFPSPVRSTELSLKNTYPFSQQDLTLQESLRGQTVAPTAPLDVVLAQESTAA LPTALQSPLPFALDTSASPPDAPAAGSDTAASPELTFPLTTEVTETPSEPLPNHSSFSTGEFYPTRLPTPQTVPPLLTLD QIAQVPDGPNPDESAGRRPSIRTQPSTPDEAPLDLREELLTPKVIYSPSTTILTPSAYGKSWRQASVGFGFQHRTRFTNS ADGAIGVGIGLGDARKYVGLDVGLTLTDLDNFDRGIISFKLHRRLPDLFAVAVGVNDAISWGPGDIDGPSPYGVVSKTFI FKENTKDLFSRMYVSAGLGTGRYRTENNVFTDDDTPGVFGSVALRIADPVNAIAEWSGQDLSLGFSLRPFREIPLIITPA ITDVTGTAGDGVRFIFGVGYAITF
Sequences:
>Translated_424_residues MRLFVDKFMPLKPYAICQLSLLSISVCLSFPSPVRSTELSLKNTYPFSQQDLTLQESLRGQTVAPTAPLDVVLAQESTAA LPTALQSPLPFALDTSASPPDAPAAGSDTAASPELTFPLTTEVTETPSEPLPNHSSFSTGEFYPTRLPTPQTVPPLLTLD QIAQVPDGPNPDESAGRRPSIRTQPSTPDEAPLDLREELLTPKVIYSPSTTILTPSAYGKSWRQASVGFGFQHRTRFTNS ADGAIGVGIGLGDARKYVGLDVGLTLTDLDNFDRGIISFKLHRRLPDLFAVAVGVNDAISWGPGDIDGPSPYGVVSKTFI FKENTKDLFSRMYVSAGLGTGRYRTENNVFTDDDTPGVFGSVALRIADPVNAIAEWSGQDLSLGFSLRPFREIPLIITPA ITDVTGTAGDGVRFIFGVGYAITF >Mature_424_residues MRLFVDKFMPLKPYAICQLSLLSISVCLSFPSPVRSTELSLKNTYPFSQQDLTLQESLRGQTVAPTAPLDVVLAQESTAA LPTALQSPLPFALDTSASPPDAPAAGSDTAASPELTFPLTTEVTETPSEPLPNHSSFSTGEFYPTRLPTPQTVPPLLTLD QIAQVPDGPNPDESAGRRPSIRTQPSTPDEAPLDLREELLTPKVIYSPSTTILTPSAYGKSWRQASVGFGFQHRTRFTNS ADGAIGVGIGLGDARKYVGLDVGLTLTDLDNFDRGIISFKLHRRLPDLFAVAVGVNDAISWGPGDIDGPSPYGVVSKTFI FKENTKDLFSRMYVSAGLGTGRYRTENNVFTDDDTPGVFGSVALRIADPVNAIAEWSGQDLSLGFSLRPFREIPLIITPA ITDVTGTAGDGVRFIFGVGYAITF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45501; Mature: 45501
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFVDKFMPLKPYAICQLSLLSISVCLSFPSPVRSTELSLKNTYPFSQQDLTLQESLRG CEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCC QTVAPTAPLDVVLAQESTAALPTALQSPLPFALDTSASPPDAPAAGSDTAASPELTFPLT CEECCCCCEEEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEE TEVTETPSEPLPNHSSFSTGEFYPTRLPTPQTVPPLLTLDQIAQVPDGPNPDESAGRRPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHCCCCCC IRTQPSTPDEAPLDLREELLTPKVIYSPSTTILTPSAYGKSWRQASVGFGFQHRTRFTNS CCCCCCCCCCCCHHHHHHHCCCEEEECCCCCEECCHHHCCCHHHHHCCCCCHHHCCCCCC ADGAIGVGIGLGDARKYVGLDVGLTLTDLDNFDRGIISFKLHRRLPDLFAVAVGVNDAIS CCCEEEEEECCCCCCCEEEEECCEEEECCCCCCCCEEEEEHHHCCCCCEEEEECCCCCCC WGPGDIDGPSPYGVVSKTFIFKENTKDLFSRMYVSAGLGTGRYRTENNVFTDDDTPGVFG CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCCCCE SVALRIADPVNAIAEWSGQDLSLGFSLRPFREIPLIITPAITDVTGTAGDGVRFIFGVGY EEEEEECCHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCE AITF EEEC >Mature Secondary Structure MRLFVDKFMPLKPYAICQLSLLSISVCLSFPSPVRSTELSLKNTYPFSQQDLTLQESLRG CEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCC QTVAPTAPLDVVLAQESTAALPTALQSPLPFALDTSASPPDAPAAGSDTAASPELTFPLT CEECCCCCEEEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEE TEVTETPSEPLPNHSSFSTGEFYPTRLPTPQTVPPLLTLDQIAQVPDGPNPDESAGRRPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHCCCCCC IRTQPSTPDEAPLDLREELLTPKVIYSPSTTILTPSAYGKSWRQASVGFGFQHRTRFTNS CCCCCCCCCCCCHHHHHHHCCCEEEECCCCCEECCHHHCCCHHHHHCCCCCHHHCCCCCC ADGAIGVGIGLGDARKYVGLDVGLTLTDLDNFDRGIISFKLHRRLPDLFAVAVGVNDAIS CCCEEEEEECCCCCCCEEEEECCEEEECCCCCCCCEEEEEHHHCCCCCEEEEECCCCCCC WGPGDIDGPSPYGVVSKTFIFKENTKDLFSRMYVSAGLGTGRYRTENNVFTDDDTPGVFG CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEECCCCEECCCCCCCCCE SVALRIADPVNAIAEWSGQDLSLGFSLRPFREIPLIITPAITDVTGTAGDGVRFIFGVGY EEEEEECCHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCE AITF EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA