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The map label for this gene is ytfP [H]

Identifier: 158337006

GI number: 158337006

Start: 3930812

End: 3932032

Strand: Reverse

Name: ytfP [H]

Synonym: AM1_3879

Alternate gene names: 158337006

Gene position: 3932032-3930812 (Counterclockwise)

Preceding gene: 158337007

Following gene: 158337005

Centisome position: 60.46

GC content: 52.99

Gene sequence:

>1221_bases
ATGGTGAAGATTGTCGTCATCGGCGGTGGGGCGGCTGGTTTCTGGGGGGCGATTGCCTGTGCAGAAGCCTATTCCCAAAC
TCGGATCACGATTTTGGAAGCCAGTGGTCAACTGCTCTCTAAAGTGCGAATTTCCGGGGGTGGGCGCTGCAATGTTACCC
ATGCTTGTTTTGAACCCTCTGAACTAGTGGGCAATTATCCGCGCGGGTCTAAAGCCTTACGAGGTGCATTTAGTCGGTTT
CAGCCCCAGGATACGGTGCAGTGGTTCCGAGCCCACGGAGTTTCCTTAAAAACGGAAGCCGATGGCCGCATGTTTCCCAA
AACCAATGATTCGGAAACCATTATTGCCTGTCTGCAACGAACGGCTCAAAACTTAGGGATTCAGGTGCGGACGGGGATGT
CCGTTACTCATATCAAGCATGAAGGGCAATTTACAGTTGGGTGTAAATCTGGGGAGAAGCTGAGGTGCGATCGCATTCTT
TTAGCCACGGGCAGTCATCCCCTCGGCTATCGCCTCGCCCAACAGCTCGGCCATACCCTCGTATCGCCAGTACCGTCCCT
ATTTACCTTCAAAATCAAAGATCCGAGATTGCAAGGCTTAGCCGGTATCGCGGTTGATCCAGTGCAGTTGCGGTTAACGG
TGAATGATCAAAAGTTTGATCAGCAGGGGCCGCTCTTGGTCACCCATTGGGGACTGAGTGGTCCTGCAGTCCTCAAACTC
TCGGCTTGGGGAGCACGGGCCTTTCATCAACATCGATATCAGGGAGAATTGACGGTCAATTGGGTGCCCCATTCCTCCTA
TGAAGACCTGCGTCAGCAGTTGGGGCAAACCCGAACTGCCGTTGCCAAGCGTGCGATCGCAAACCACTGCCCCGTCGACT
TACCCCAGCGCCTCTGGCAAAAACTGATTGCTGCAGCAGGGATTTCTCCCCAACAGCGCTGGGCAGATCTATCCAAAACC
CATTTGCGATCGCTGCTGCAAGAACTAACCCAAGGTAAGTTTCATGTCTTAGGGAAAGGAGTCTTCAAAGACGAGTTTGT
TACCTGCGGCGGCGTCGACCTTAAACAAATCAACTTCAAAACCATGGAAAGTCGCTGCTGTCCCGGACTCTATTTTGCTG
GCGAAGTGATCGACATTGATGGCATTACCGGTGGATTTAACTTTCAAAACGCCTGGACGACAGCCTGGTTAGCGGCCCAG
GCCATGGGGCAACCTGAGTAG

Upstream 100 bases:

>100_bases
GGGCAAAACCCTGACTGAAGTCGCGTCTGATGCCATTGATACCTATTTAAAAAATCAATCTCAGACCTAAATTGCACCTA
ATTTTAGGTGTAATAAAGCC

Downstream 100 bases:

>100_bases
AGCGACTGGGAACCGCTTTACCCAGAGGAAAAAACCACTCAAAGGACGGTTCTGTGGTTTCATACATCAATGGAGACTAT
CTCTAACACCTTGTGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MVKIVVIGGGAAGFWGAIACAEAYSQTRITILEASGQLLSKVRISGGGRCNVTHACFEPSELVGNYPRGSKALRGAFSRF
QPQDTVQWFRAHGVSLKTEADGRMFPKTNDSETIIACLQRTAQNLGIQVRTGMSVTHIKHEGQFTVGCKSGEKLRCDRIL
LATGSHPLGYRLAQQLGHTLVSPVPSLFTFKIKDPRLQGLAGIAVDPVQLRLTVNDQKFDQQGPLLVTHWGLSGPAVLKL
SAWGARAFHQHRYQGELTVNWVPHSSYEDLRQQLGQTRTAVAKRAIANHCPVDLPQRLWQKLIAAAGISPQQRWADLSKT
HLRSLLQELTQGKFHVLGKGVFKDEFVTCGGVDLKQINFKTMESRCCPGLYFAGEVIDIDGITGGFNFQNAWTTAWLAAQ
AMGQPE

Sequences:

>Translated_406_residues
MVKIVVIGGGAAGFWGAIACAEAYSQTRITILEASGQLLSKVRISGGGRCNVTHACFEPSELVGNYPRGSKALRGAFSRF
QPQDTVQWFRAHGVSLKTEADGRMFPKTNDSETIIACLQRTAQNLGIQVRTGMSVTHIKHEGQFTVGCKSGEKLRCDRIL
LATGSHPLGYRLAQQLGHTLVSPVPSLFTFKIKDPRLQGLAGIAVDPVQLRLTVNDQKFDQQGPLLVTHWGLSGPAVLKL
SAWGARAFHQHRYQGELTVNWVPHSSYEDLRQQLGQTRTAVAKRAIANHCPVDLPQRLWQKLIAAAGISPQQRWADLSKT
HLRSLLQELTQGKFHVLGKGVFKDEFVTCGGVDLKQINFKTMESRCCPGLYFAGEVIDIDGITGGFNFQNAWTTAWLAAQ
AMGQPE
>Mature_406_residues
MVKIVVIGGGAAGFWGAIACAEAYSQTRITILEASGQLLSKVRISGGGRCNVTHACFEPSELVGNYPRGSKALRGAFSRF
QPQDTVQWFRAHGVSLKTEADGRMFPKTNDSETIIACLQRTAQNLGIQVRTGMSVTHIKHEGQFTVGCKSGEKLRCDRIL
LATGSHPLGYRLAQQLGHTLVSPVPSLFTFKIKDPRLQGLAGIAVDPVQLRLTVNDQKFDQQGPLLVTHWGLSGPAVLKL
SAWGARAFHQHRYQGELTVNWVPHSSYEDLRQQLGQTRTAVAKRAIANHCPVDLPQRLWQKLIAAAGISPQQRWADLSKT
HLRSLLQELTQGKFHVLGKGVFKDEFVTCGGVDLKQINFKTMESRCCPGLYFAGEVIDIDGITGGFNFQNAWTTAWLAAQ
AMGQPE

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=388, Percent_Identity=30.9278350515464, Blast_Score=165, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 44498; Mature: 44498

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIVVIGGGAAGFWGAIACAEAYSQTRITILEASGQLLSKVRISGGGRCNVTHACFEPS
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHEECCCCEEEEEEECCCHH
ELVGNYPRGSKALRGAFSRFQPQDTVQWFRAHGVSLKTEADGRMFPKTNDSETIIACLQR
HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHH
TAQNLGIQVRTGMSVTHIKHEGQFTVGCKSGEKLRCDRILLATGSHPLGYRLAQQLGHTL
HHHHCCEEEECCCEEEEEEECCEEEEECCCCCCEEECEEEEECCCCCHHHHHHHHHHHHH
VSPVPSLFTFKIKDPRLQGLAGIAVDPVQLRLTVNDQKFDQQGPLLVTHWGLSGPAVLKL
HCCCCCEEEEEECCCCCCCCCCCEECCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE
SAWGARAFHQHRYQGELTVNWVPHSSYEDLRQQLGQTRTAVAKRAIANHCPVDLPQRLWQ
ECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHH
KLIAAAGISPQQRWADLSKTHLRSLLQELTQGKFHVLGKGVFKDEFVTCGGVDLKQINFK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCEEECCHH
TMESRCCPGLYFAGEVIDIDGITGGFNFQNAWTTAWLAAQAMGQPE
HHHHCCCCCEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKIVVIGGGAAGFWGAIACAEAYSQTRITILEASGQLLSKVRISGGGRCNVTHACFEPS
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHEECCCCEEEEEEECCCHH
ELVGNYPRGSKALRGAFSRFQPQDTVQWFRAHGVSLKTEADGRMFPKTNDSETIIACLQR
HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHH
TAQNLGIQVRTGMSVTHIKHEGQFTVGCKSGEKLRCDRILLATGSHPLGYRLAQQLGHTL
HHHHCCEEEECCCEEEEEEECCEEEEECCCCCCEEECEEEEECCCCCHHHHHHHHHHHHH
VSPVPSLFTFKIKDPRLQGLAGIAVDPVQLRLTVNDQKFDQQGPLLVTHWGLSGPAVLKL
HCCCCCEEEEEECCCCCCCCCCCEECCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE
SAWGARAFHQHRYQGELTVNWVPHSSYEDLRQQLGQTRTAVAKRAIANHCPVDLPQRLWQ
ECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHH
KLIAAAGISPQQRWADLSKTHLRSLLQELTQGKFHVLGKGVFKDEFVTCGGVDLKQINFK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCEEECCHH
TMESRCCPGLYFAGEVIDIDGITGGFNFQNAWTTAWLAAQAMGQPE
HHHHCCCCCEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]