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The map label for this gene is ygeK [C]

Identifier: 158336971

GI number: 158336971

Start: 3897145

End: 3897408

Strand: Reverse

Name: ygeK [C]

Synonym: AM1_3844

Alternate gene names: 158336971

Gene position: 3897408-3897145 (Counterclockwise)

Preceding gene: 158336972

Following gene: 158336970

Centisome position: 59.93

GC content: 47.35

Gene sequence:

>264_bases
ATGAGTAGTGGCGAGCTGCAAGGAAATCATCAGTTGTCTGAACGGGAGTTGCAAGTCATTGAACTCGTGGCCTCTGGCCT
TAAAAATGAAGAAATTTCTCAGCGGCTAGATATCAGTAAGCGAACGGTGGACAACCACATTAGCAATATCCTCACTAAAA
CGGACACGGATAACCGGGTTGCTCTCGTTCGGTGGGCTTTGCAGTGGGGTAAAGTATGTCTCGATGACGTAAATTGTTGC
ACCTTACCTCAGGCTGAGCCATAA

Upstream 100 bases:

>100_bases
TGTTAAATATGACAATCTGTTCCAAACCTGCAGATTGTGAGGTTAATCCCTACAATGTGAAGATGAGAATGAGTATTTAT
GCAGGGGTACACGGCAGAGC

Downstream 100 bases:

>100_bases
AAGATTTTGGCCTTACCCTGGTTGTTTCGAAAGACAGCATGACTGTGACCTACAAAGAATACGATATCCAATGCCCCGGT
TTGCCCTTAGCGATTTATCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator LuxR Family; LuxR Transcriptional Regulator; Two Component Transcriptional Regulator LuxR Family; Transcriptional Regulator LuxR Family Protein; Response Regulator Receiver Domain Protein; Two Component Transcriptional Regulator; Response Regulator Like-Protein; LuxR Family Transcriptional Regulatory Protein; Bacterial Regulatory Protein LuxR Family; Regulatory Protein LuxR; Sigma-70 Region 4 Family

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSSGELQGNHQLSERELQVIELVASGLKNEEISQRLDISKRTVDNHISNILTKTDTDNRVALVRWALQWGKVCLDDVNCC
TLPQAEP

Sequences:

>Translated_87_residues
MSSGELQGNHQLSERELQVIELVASGLKNEEISQRLDISKRTVDNHISNILTKTDTDNRVALVRWALQWGKVCLDDVNCC
TLPQAEP
>Mature_86_residues
SSGELQGNHQLSERELQVIELVASGLKNEEISQRLDISKRTVDNHISNILTKTDTDNRVALVRWALQWGKVCLDDVNCCT
LPQAEP

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9773; Mature: 9642

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGELQGNHQLSERELQVIELVASGLKNEEISQRLDISKRTVDNHISNILTKTDTDNRV
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ALVRWALQWGKVCLDDVNCCTLPQAEP
HHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SSGELQGNHQLSERELQVIELVASGLKNEEISQRLDISKRTVDNHISNILTKTDTDNRV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ALVRWALQWGKVCLDDVNCCTLPQAEP
HHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA