| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336962
Identifier: 158336962
GI number: 158336962
Start: 3884228
End: 3885535
Strand: Direct
Name: 158336962
Synonym: AM1_3835
Alternate gene names: NA
Gene position: 3884228-3885535 (Clockwise)
Preceding gene: 158336960
Following gene: 158336966
Centisome position: 59.72
GC content: 48.85
Gene sequence:
>1308_bases ATGCAACACCAACTAACCACCACCAAGTTTCAGCCTTCTAAAGTAGCCCAGGTACTGCGAAACGCAACCAGCGCAACCTT GGGAGCCATGGTTCTCACAAGTCTAGTCCCCTCACCTGCTGCTGCTCTTTCTGGTCAAAAAACCATCCCAGCATCAAGGG TTGCCCAAATAATGAACGGCACCTTGACAGACGCTAAAATTCGTCTCAACAACGTGGATCTGAATGGCTATGGTCGCTAC CTCAAAGACGATTGGTATAAACCTAATGATTCCTATTTCCAATTTATGGGCAGAAAACAGTCTATTTCGCTCCAGCATTG GACAGGTAGACGGGAAAAAGGTCATATGCGTTGGTATTACTACATCAATAATGTCAACACAGAAGCGGTGACGCTACGTC ACGAAAACAATCGCTATGTGTTCCGAGCATTCTTCGAAAGTCGCGATCGTGAAATTAAAGGACTGTGCCGCTGGAAGAAA GCAGTAGGCAAAAACAAAGGGAAATATACCCAGTGCAAACCCAGTGGTAATGATCGCCCCGCTCCCGATGGTGATTTTAA CCATGCCAAGGTGCAAATCGCTCTCAAACCTGTAGTTCGCAACGGCGGGATTATCCTCACGGTGCCTCAGCGAAGCAATG TCAAAATTGGCGGCGATTTACAAATCCAAGGTGTTCTCGGTTGGTTTAACAAGATTGAGGACGCCATCGAGAACTATGGC AAACGCAAAGTGGGCGATGCGATCTACCATGCATTCCAAGATCCTCAACGACAGGCAACGATGCAACAACGCACGGCCAA TGCCATTAGCCGATTAAATGCTTTTGCTAGATTCGCAAATGTACGGCCCGTCAGGTTCAAGCCCAACGGTGATTTGGTGG TGGCCTACGACATCAAAGTCGATAAAAGTATGGTGTCAACCGTCCTCCAGCAAGTGAAGCATCCTCGCCAGGGTAAGGCT TGTAAGGGCACGATGGACCTCAAAGCACGGTTTAAATCCCAGTATCCAGCTAAACTCACCTATCAATTTGAAGGCGAGAA TGGGGCACTCAGCCCTAAGCAAACCCTCACGCTGGCAAGTAAAACCCCCAAAACCATCACCCTAAAGCGCAGAACAGGTG GACCAGGGACAACTAAGCAAATTGTCCAACTGCCGAAGCGCGGCAAGCGCCTCAGGGTGTCAGGGAAAAGTCGTGCCCAT TGGTCATTTGTCATCGATGGCCAACGAGTCTCAGGCAAAACCCCTTGGAAACCCTATTCCATCTATTGCCCTATTCCTCA ACAATCGCCAGGCGGATTCAAGTCTTAA
Upstream 100 bases:
>100_bases CTGAGGCCAAATTTTTTACAGAGTCCCTGCATATCAATCCAAAAACAAACCTAACAGTTGAGTAAGGTCAACCACCATCC AATCAACTTAGGAAACCGTT
Downstream 100 bases:
>100_bases TCAGGAAGGTGAACGCCACCTTCTCAAGGGATTCTCACTTATCTTGATCAATTGATGGCTGTAGCTGTGGGTATTTTGCC TACAGCTACAATTTTCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNGTLTDAKIRLNNVDLNGYGRY LKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYYYINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKK AVGKNKGKYTQCKPSGNDRPAPDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKVDKSMVSTVLQQVKHPRQGKA CKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLASKTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAH WSFVIDGQRVSGKTPWKPYSIYCPIPQQSPGGFKS
Sequences:
>Translated_435_residues MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNGTLTDAKIRLNNVDLNGYGRY LKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYYYINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKK AVGKNKGKYTQCKPSGNDRPAPDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKVDKSMVSTVLQQVKHPRQGKA CKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLASKTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAH WSFVIDGQRVSGKTPWKPYSIYCPIPQQSPGGFKS >Mature_435_residues MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNGTLTDAKIRLNNVDLNGYGRY LKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYYYINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKK AVGKNKGKYTQCKPSGNDRPAPDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKVDKSMVSTVLQQVKHPRQGKA CKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLASKTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAH WSFVIDGQRVSGKTPWKPYSIYCPIPQQSPGGFKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48988; Mature: 48988
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCC TLTDAKIRLNNVDLNGYGRYLKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYY CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCEEEEE YINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKKAVGKNKGKYTQCKPSGNDRP EEECCCCEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC APDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG CCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHCC KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKV CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEE DKSMVSTVLQQVKHPRQGKACKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLAS CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHEEEEEC KTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAHWSFVIDGQRVSGKTPWKPYS CCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECCEECCCCCCCCEE IYCPIPQQSPGGFKS EEECCCCCCCCCCCC >Mature Secondary Structure MQHQLTTTKFQPSKVAQVLRNATSATLGAMVLTSLVPSPAAALSGQKTIPASRVAQIMNG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCC TLTDAKIRLNNVDLNGYGRYLKDDWYKPNDSYFQFMGRKQSISLQHWTGRREKGHMRWYY CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCEEEEE YINNVNTEAVTLRHENNRYVFRAFFESRDREIKGLCRWKKAVGKNKGKYTQCKPSGNDRP EEECCCCEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC APDGDFNHAKVQIALKPVVRNGGIILTVPQRSNVKIGGDLQIQGVLGWFNKIEDAIENYG CCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCEEECCCEEEEHHHHHHHHHHHHHHHCC KRKVGDAIYHAFQDPQRQATMQQRTANAISRLNAFARFANVRPVRFKPNGDLVVAYDIKV CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEE DKSMVSTVLQQVKHPRQGKACKGTMDLKARFKSQYPAKLTYQFEGENGALSPKQTLTLAS CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHEEEEEC KTPKTITLKRRTGGPGTTKQIVQLPKRGKRLRVSGKSRAHWSFVIDGQRVSGKTPWKPYS CCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEEECCEECCCCCCCCEE IYCPIPQQSPGGFKS EEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA