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The map label for this gene is nifU [H]

Identifier: 158336706

GI number: 158336706

Start: 3623183

End: 3623662

Strand: Direct

Name: nifU [H]

Synonym: AM1_3574

Alternate gene names: 158336706

Gene position: 3623183-3623662 (Clockwise)

Preceding gene: 158336703

Following gene: 158336707

Centisome position: 55.71

GC content: 50.0

Gene sequence:

>480_bases
ATGGCCCTGGACAATCTCCGAAAACTGTATCAACAAGTCATATTAGAACATGACAAAAAGCTTCGTCATCGCGGCATGAC
GGATCCAGTCCATCGTCACCAATGGGGACATAATCCTTCCTATGGCGATACGATTGAGCTGACGGTTCAGTTGGAAGCGC
TAGAAGAGCGGATTGCGGCTGTTAAATTTGAAGGTGAGGGATGTGCGATCGCAATGGCGTCTGCTGACTTAATGGCAGAT
GCGATGCAGGGAAAACCCCTCCCTGAAGCCTTGCAAATGGTCCAAGCATTCCAAAATATGATGAAAGGCGAAGGAGAATT
CCCGCGAGAGCATCGTAAGCTCAACGTCATGCAGGGGGTGGCCCAATTGCCCGTTCGGATTAAATGTGCCACCCTAGCCT
GGCACACCCTTAAGGCCGCCTTAGAGCATCAGAGTGTAGAATCAGCGGATGAGTTTGTCAGCAACGAGGAGAATGATTAA

Upstream 100 bases:

>100_bases
TGCCTTTCGTTAAGATCGAAGGGGCAACAGCCAGTATCCTAGATACATTCCCTTGATTCATCCTCGATTGTGGAGAGCGA
TTCCTCACTGTCTTCAGATT

Downstream 100 bases:

>100_bases
TGCCCACCCCCGAGTTTTTTCAGCAGGCTTGTCAGTGGTGTGCGATCTTGATGCTCGCCAGTGGTGTTTTTACAGGTCTA
GCCTATGTCTTTAAATGGGG

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MALDNLRKLYQQVILEHDKKLRHRGMTDPVHRHQWGHNPSYGDTIELTVQLEALEERIAAVKFEGEGCAIAMASADLMAD
AMQGKPLPEALQMVQAFQNMMKGEGEFPREHRKLNVMQGVAQLPVRIKCATLAWHTLKAALEHQSVESADEFVSNEEND

Sequences:

>Translated_159_residues
MALDNLRKLYQQVILEHDKKLRHRGMTDPVHRHQWGHNPSYGDTIELTVQLEALEERIAAVKFEGEGCAIAMASADLMAD
AMQGKPLPEALQMVQAFQNMMKGEGEFPREHRKLNVMQGVAQLPVRIKCATLAWHTLKAALEHQSVESADEFVSNEEND
>Mature_158_residues
ALDNLRKLYQQVILEHDKKLRHRGMTDPVHRHQWGHNPSYGDTIELTVQLEALEERIAAVKFEGEGCAIAMASADLMADA
MQGKPLPEALQMVQAFQNMMKGEGEFPREHRKLNVMQGVAQLPVRIKCATLAWHTLKAALEHQSVESADEFVSNEEND

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17958; Mature: 17827

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDNLRKLYQQVILEHDKKLRHRGMTDPVHRHQWGHNPSYGDTIELTVQLEALEERIAA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHH
VKFEGEGCAIAMASADLMADAMQGKPLPEALQMVQAFQNMMKGEGEFPREHRKLNVMQGV
EEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AQLPVRIKCATLAWHTLKAALEHQSVESADEFVSNEEND
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALDNLRKLYQQVILEHDKKLRHRGMTDPVHRHQWGHNPSYGDTIELTVQLEALEERIAA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHH
VKFEGEGCAIAMASADLMADAMQGKPLPEALQMVQAFQNMMKGEGEFPREHRKLNVMQGV
EEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AQLPVRIKCATLAWHTLKAALEHQSVESADEFVSNEEND
HHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]