Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158336282

Identifier: 158336282

GI number: 158336282

Start: 3170791

End: 3172143

Strand: Reverse

Name: 158336282

Synonym: AM1_3144

Alternate gene names: NA

Gene position: 3172143-3170791 (Counterclockwise)

Preceding gene: 158336283

Following gene: 158336280

Centisome position: 48.77

GC content: 35.11

Gene sequence:

>1353_bases
ATGTCTTTTTCTCAAATAATTCAAATTGTAATCTATCTGATTTTTATTTATTTGCTTTTGTCTCTAATTGTCAGTGAGAT
TCAAGAAGCAATCTCTTCGATTCTTGAATTTAGAGCAAATCGATTAAAAACATCACTTTTTATATTGTTTGGTGAAGATA
AAGTTGATGCCTACAATATGCCTAGTGAAAATGACGAGAATGATGGAAATAAAAATAGCAAAAAAAGTAAGAAATCTCTT
ACTAATCTTTTATATGAAAGTCCATTAATAGCATCATTGAATCAACGAACATACAAAAATTATGTAAGAAGATTATGGCA
GTTTATTCTAAGTATTTTTCTAGAAAATCATCGTAGCACAAAATTTAGATTTTCTACAGGACCTTCATATATTGACTCTT
CTGAGACTTTTGCAAATGCACTAATCGATACATTGCAAGATGAACTATCTCAACTAGATTCTCCCCAATATCTAAAGAAT
GATGATACTGTTGATATTGTCACTAACAAGCTACAGTATTTAGAACCAAAAATTGCAGGAATATCGTCACTAATAAGAAT
TACAGAAGCCTTAAGAATCCAAAGTAGCAATGCTACGTTGGCGGATTTTAGTGAGCAAATTCAGAAAATCTTTGTTAGTG
TCCAGAAAAGATCTTCAGGGGTATACAAGCGTAATGCTAGAGGTGTATCTTTCCTTTTAGGTTTTATGGTCGCGGTTATT
GCTAATGCTGATACTTTTCAAATCTTGCGTAGCTTAAACCATTCACCTACAAAATATACAACCTCGCTTTCTACAGCTAT
TGAAGAAAATTCAGAGTTGTTTCGCTGTGACTCTAAACAATCAGAGGGCAATCAAAACACTCAAGACACCCCTTCTCTAG
ACTGTATTGATAACTTTGTTTCTGAAATAAATCCTATCCTTGAGTCCATAGGCCCTTTACCTCTTGGTTGGAACTATACA
CCGCCAGAAAAATCAGATCCGTCATCTCAAGCTAAGAAAGATCAGAAAATATCTGTAATAGACAAAGCTTCTCCTTCTAC
TAAAGAAGAAGAGCCTACTCAAGAAAACCAGCAGAAACCACTATCTGAAGCGGAACAGAACTCGAAAACTATCCAGACTG
AACAGCCGTCTTCATCAGAACAGCCTTCTGACTCACAGCAAAATGAACCAAAAATTACTTGGACCAAAATTACACAACAA
ATCAACCATCAAGGTGGCTTATTTAAAGCCACACTTGGCTGGTTAGTAACTGCTATTGCAATTGCCATGGGAGCTCCATT
CTGGTTTGACTTATTAGGTCGGATTTTAAATGTTCGGAATGCCGGTGCTCCTCCTAATGAAGAAAAAAGCTAA

Upstream 100 bases:

>100_bases
AATAGCGATATCTTTGTAGTATTTTACATTTCAATGCAGATCATTATGATAGATAATTGCTATTAATAAATCATATAAAA
TTCTATCGTTTATACTATTT

Downstream 100 bases:

>100_bases
ATCTTTTATCATCTAAGATCAAGAAGCTTAATTCACGTTGGCTGAGGCATAAGTGATAGAGAATACGATGATCAAAATAG
ATCTAAATCAGTAACAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNMPSENDENDGNKNSKKSKKSL
TNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRSTKFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKN
DDTVDIVTNKLQYLEPKIAGISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI
ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFVSEINPILESIGPLPLGWNYT
PPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKPLSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQ
INHQGGLFKATLGWLVTAIAIAMGAPFWFDLLGRILNVRNAGAPPNEEKS

Sequences:

>Translated_450_residues
MSFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNMPSENDENDGNKNSKKSKKSL
TNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRSTKFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKN
DDTVDIVTNKLQYLEPKIAGISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI
ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFVSEINPILESIGPLPLGWNYT
PPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKPLSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQ
INHQGGLFKATLGWLVTAIAIAMGAPFWFDLLGRILNVRNAGAPPNEEKS
>Mature_449_residues
SFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNMPSENDENDGNKNSKKSKKSLT
NLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRSTKFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKND
DTVDIVTNKLQYLEPKIAGISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVIA
NADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFVSEINPILESIGPLPLGWNYTP
PEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKPLSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQI
NHQGGLFKATLGWLVTAIAIAMGAPFWFDLLGRILNVRNAGAPPNEEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50590; Mature: 50459

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC
PSENDENDGNKNSKKSKKSLTNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRST
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKNDDTVDIVTNKLQYLEPKIAG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCHHHHH
ISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFV
CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHH
SEINPILESIGPLPLGWNYTPPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHCC
LSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQINHQGGLFKATLGWLVTAIA
HHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAMGAPFWFDLLGRILNVRNAGAPPNEEKS
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SFSQIIQIVIYLIFIYLLLSLIVSEIQEAISSILEFRANRLKTSLFILFGEDKVDAYNM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC
PSENDENDGNKNSKKSKKSLTNLLYESPLIASLNQRTYKNYVRRLWQFILSIFLENHRST
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KFRFSTGPSYIDSSETFANALIDTLQDELSQLDSPQYLKNDDTVDIVTNKLQYLEPKIAG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCHHHHH
ISSLIRITEALRIQSSNATLADFSEQIQKIFVSVQKRSSGVYKRNARGVSFLLGFMVAVI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
ANADTFQILRSLNHSPTKYTTSLSTAIEENSELFRCDSKQSEGNQNTQDTPSLDCIDNFV
CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHH
SEINPILESIGPLPLGWNYTPPEKSDPSSQAKKDQKISVIDKASPSTKEEEPTQENQQKP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHCC
LSEAEQNSKTIQTEQPSSSEQPSDSQQNEPKITWTKITQQINHQGGLFKATLGWLVTAIA
HHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IAMGAPFWFDLLGRILNVRNAGAPPNEEKS
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA