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The map label for this gene is oxaA [H]

Identifier: 158336230

GI number: 158336230

Start: 3121570

End: 3122784

Strand: Reverse

Name: oxaA [H]

Synonym: AM1_3092

Alternate gene names: 158336230

Gene position: 3122784-3121570 (Counterclockwise)

Preceding gene: 158336231

Following gene: 158336229

Centisome position: 48.02

GC content: 45.76

Gene sequence:

>1215_bases
ATGAACTTTATTGGATTTATCTCGGACAACATTATGTTGCCGATCCTGGATTTTTTCTACGGGATCGTACCTAGTTATGG
ATTGGCCATCGTTGCCCTAACGCTGGTGATTCGCTCTGTTTTGTATCCGGTGAGTGCAGGCCAAATTCGCAATATGCGGC
GAATGAAAGTCTCACAACCGGTGATGCAAAAGCGCCAAAAGGAGCTGCAAGAGCGCTACAAAGATGATCCAGCGAAGTTG
CAAGAGGAGCAAACCAAGCTATTTAAAGAGTTTGGCAATCCTCTAGCCGGATGTTTTCCGCTGTTAATCCAAATGCCGAT
TCTATTTGCGTTGTTTGCAACGTTGAGAGGATCGCCCTTTGCCAACGTTAACTATTCGGTGAACTTAAAAATTCTGCCCC
AGGATAAGATTGCGGAAGTTCAGCCTGAGCCATTTACGACTAAATCACAGAATATTTTTGTGGCGGAGAAAACCCACTAC
CCTGTAGTTGGTATTGTGCCTTCTGGTAAAGAGTTAGGGGTGGGTCAATCTACTGACTTCCAGTTTCAAACGATTGGTGG
GAAACCGCTCCAAGATATTATTCCTGAGTCTGAAGCTAACGATATCGTTCCTACTTGGAAGGTGATGAAGGGTGAAGATC
GGGTCAGCATTGATGACAATGGTCATATTGTTGCCCTTCAACCCGGTGATGTCACGATTCAAGGGACGTTGACTGGGATT
GCTGCTGAGAAAGGGTTCTTATTTATTAAAGCCTTAGGTCGTGTGGGTGCTGTTGAGGGTGAAATCTTTACCACAACAGA
TGATGGCGCTCAGTTCAACTCGGATGCCATCCATTGGGATATTTTGTTTATGGTGATTGGGTTTGGCGTATCTTTATATG
TCAACCAGTTACTGTCAGGACAAAGCGGTGGCGACTCTGGGTCACAGCAGCAAGCGATGAATAAGTATATGCCGGTGATG
TTTTCAGGCATGTTTTTATTCTTCCCTTTGCCTGCGGGGGTGCTGTTGTATATGCTGCTAGCCAACATCTTCCAAACGGT
TCAAAGCTATTTCTTATCGAAAGAGCCATTGCCTGAGAATCTGCAAAAGATTGTGGATGAACAAGAGCGGAAGAAAGCCA
AAGAAGAGCGGGCATCGAAGGTGGTGGCTGAAGATGGTGAGCGGGGTGCGCTACCCTTTGAACCTGAGTACTCTAAAAAG
AAAGCATCGAGTTGA

Upstream 100 bases:

>100_bases
GCTTGTAAAGGCTAGAAGCTTTTATATTTCCTGGACACAGTGAAAAGCTCAGTCAACTCAGTATTTTGCTAATTTCCGCA
CTTAGGTCGGCTATACACGA

Downstream 100 bases:

>100_bases
CACCCATGAGTGAGTCAAATGTTCAACGGGGACAAGAGTGGTTGTCCAATTTGTTAGGCCATTTGGGAGTTGAGACTCCG
GTCAGTATCGATAAGCCAGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNFIGFISDNIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVMQKRQKELQERYKDDPAKL
QEEQTKLFKEFGNPLAGCFPLLIQMPILFALFATLRGSPFANVNYSVNLKILPQDKIAEVQPEPFTTKSQNIFVAEKTHY
PVVGIVPSGKELGVGQSTDFQFQTIGGKPLQDIIPESEANDIVPTWKVMKGEDRVSIDDNGHIVALQPGDVTIQGTLTGI
AAEKGFLFIKALGRVGAVEGEIFTTTDDGAQFNSDAIHWDILFMVIGFGVSLYVNQLLSGQSGGDSGSQQQAMNKYMPVM
FSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSKEPLPENLQKIVDEQERKKAKEERASKVVAEDGERGALPFEPEYSKK
KASS

Sequences:

>Translated_404_residues
MNFIGFISDNIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVMQKRQKELQERYKDDPAKL
QEEQTKLFKEFGNPLAGCFPLLIQMPILFALFATLRGSPFANVNYSVNLKILPQDKIAEVQPEPFTTKSQNIFVAEKTHY
PVVGIVPSGKELGVGQSTDFQFQTIGGKPLQDIIPESEANDIVPTWKVMKGEDRVSIDDNGHIVALQPGDVTIQGTLTGI
AAEKGFLFIKALGRVGAVEGEIFTTTDDGAQFNSDAIHWDILFMVIGFGVSLYVNQLLSGQSGGDSGSQQQAMNKYMPVM
FSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSKEPLPENLQKIVDEQERKKAKEERASKVVAEDGERGALPFEPEYSKK
KASS
>Mature_404_residues
MNFIGFISDNIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQPVMQKRQKELQERYKDDPAKL
QEEQTKLFKEFGNPLAGCFPLLIQMPILFALFATLRGSPFANVNYSVNLKILPQDKIAEVQPEPFTTKSQNIFVAEKTHY
PVVGIVPSGKELGVGQSTDFQFQTIGGKPLQDIIPESEANDIVPTWKVMKGEDRVSIDDNGHIVALQPGDVTIQGTLTGI
AAEKGFLFIKALGRVGAVEGEIFTTTDDGAQFNSDAIHWDILFMVIGFGVSLYVNQLLSGQSGGDSGSQQQAMNKYMPVM
FSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSKEPLPENLQKIVDEQERKKAKEERASKVVAEDGERGALPFEPEYSKK
KASS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=126, Percent_Identity=37.3015873015873, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 44795; Mature: 44795

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIGFISDNIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQP
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VMQKRQKELQERYKDDPAKLQEEQTKLFKEFGNPLAGCFPLLIQMPILFALFATLRGSPF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANVNYSVNLKILPQDKIAEVQPEPFTTKSQNIFVAEKTHYPVVGIVPSGKELGVGQSTDF
CCCCEEEEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCE
QFQTIGGKPLQDIIPESEANDIVPTWKVMKGEDRVSIDDNGHIVALQPGDVTIQGTLTGI
EEEECCCCCHHHHCCCCCCCCCCCCHHEECCCCCEEECCCCCEEEECCCCEEEEEEEEEE
AAEKGFLFIKALGRVGAVEGEIFTTTDDGAQFNSDAIHWDILFMVIGFGVSLYVNQLLSG
ECCCCEEEEEEHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QSGGDSGSQQQAMNKYMPVMFSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSKEPLPEN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LQKIVDEQERKKAKEERASKVVAEDGERGALPFEPEYSKKKASS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MNFIGFISDNIMLPILDFFYGIVPSYGLAIVALTLVIRSVLYPVSAGQIRNMRRMKVSQP
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VMQKRQKELQERYKDDPAKLQEEQTKLFKEFGNPLAGCFPLLIQMPILFALFATLRGSPF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANVNYSVNLKILPQDKIAEVQPEPFTTKSQNIFVAEKTHYPVVGIVPSGKELGVGQSTDF
CCCCEEEEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCE
QFQTIGGKPLQDIIPESEANDIVPTWKVMKGEDRVSIDDNGHIVALQPGDVTIQGTLTGI
EEEECCCCCHHHHCCCCCCCCCCCCHHEECCCCCEEECCCCCEEEECCCCEEEEEEEEEE
AAEKGFLFIKALGRVGAVEGEIFTTTDDGAQFNSDAIHWDILFMVIGFGVSLYVNQLLSG
ECCCCEEEEEEHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QSGGDSGSQQQAMNKYMPVMFSGMFLFFPLPAGVLLYMLLANIFQTVQSYFLSKEPLPEN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LQKIVDEQERKKAKEERASKVVAEDGERGALPFEPEYSKKKASS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]