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The map label for this gene is ccmM [H]

Identifier: 158336190

GI number: 158336190

Start: 3074749

End: 3075681

Strand: Reverse

Name: ccmM [H]

Synonym: AM1_3052

Alternate gene names: 158336190

Gene position: 3075681-3074749 (Counterclockwise)

Preceding gene: 158336191

Following gene: 158336189

Centisome position: 47.29

GC content: 50.27

Gene sequence:

>933_bases
ATGCCTCTACGTCAGCAACCTTCGCCTCCGACTCCTTGGGATCGAGGGTTAGATCAGCCTCAAATTCATGAATCAGCCTA
TGTGCATCCCTCAACGAGTTTGATCGGAGATGTTCGTCTGGGGCATCAGGTCTTAATTGCTCCCGGCACGTCCATTCGAG
CAGACGAAGGGATGCCCTTTTACATCGGTGGGAACACCAATATTCAGGATGGTGTGGTCATCCATGGCTTAGAACGAGGG
CGAGTCACTGGAGATGATGGTGAGTCCTACTCGGTCTGGATTGGTGAACATACCTGCATTACCCATATGGCTTTGATTCA
CGGACCTGCCTATATTGGTGATGATTGCTTTATCGGCTTTCGATCAACGGTATTTAATGCAAAGGTCGGGCACCGCTGTA
TTGTGATGATGCATGCACTGATCCAGGATGTGGAAATTCCACCGGGAAAATATGTTGGATCAGGGGTTGTAATTACCAAC
CAAAGCGAGGCTGACCGACTACCGGATGCCAAGACCACCGATCATCGTTTTTCTCATCATGTGGTGGAGATCAATCGAGC
CTTACTGGCAGGCTACCGATGTGCAGACGATGTTGCCTGTACTACACCGCTGAACAATGGCCATCGCTCTGAGACAGCTC
GACCCCAGACTGACAGGCTCCAAGAACAGCTGAGCGCTGAAGTGCTGGAACAGATTCTGGGTCAACTTCGGTTGGGGAAT
CAAATTGGCATTGAACAGGCCGATGCTAGACACTTTAAGGTTGGATCTTGGCAAAGTTGTCCACCCCTTGAAGGGACCTA
TCCACAGCAAGTTCTGGATAGTCTCAATCGCAGAATGACGGAATATCAGGGTAACGCAGTGCGAGTCTTTAGCATCGACT
CCCATAAGCAACGGGTGATGGAGTGGCTCTTGCAAAGGCCTATTCCTTCTTAG

Upstream 100 bases:

>100_bases
GCTGCTAAAACCTTTGACCCTCAACAGGTCTATGGGGATGCCCCTAATCCGACGCAGCTTTGAAGGGTTCAGCCGACTTT
AAACCAATGGAGTATTAAAG

Downstream 100 bases:

>100_bases
TGCATTTCTCAGGAGAAGAGCCAAGCTATGCGCAATAGCCGATCTCAGTCCATTGCATCCTTAACGATGGTAAAAGCTGG
GTAATCTCGTCGCTTGTCAA

Product: carbon dioxide concentrating mechanism protein CcmM

Products: cofactor [C]

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPLRQQPSPPTPWDRGLDQPQIHESAYVHPSTSLIGDVRLGHQVLIAPGTSIRADEGMPFYIGGNTNIQDGVVIHGLERG
RVTGDDGESYSVWIGEHTCITHMALIHGPAYIGDDCFIGFRSTVFNAKVGHRCIVMMHALIQDVEIPPGKYVGSGVVITN
QSEADRLPDAKTTDHRFSHHVVEINRALLAGYRCADDVACTTPLNNGHRSETARPQTDRLQEQLSAEVLEQILGQLRLGN
QIGIEQADARHFKVGSWQSCPPLEGTYPQQVLDSLNRRMTEYQGNAVRVFSIDSHKQRVMEWLLQRPIPS

Sequences:

>Translated_310_residues
MPLRQQPSPPTPWDRGLDQPQIHESAYVHPSTSLIGDVRLGHQVLIAPGTSIRADEGMPFYIGGNTNIQDGVVIHGLERG
RVTGDDGESYSVWIGEHTCITHMALIHGPAYIGDDCFIGFRSTVFNAKVGHRCIVMMHALIQDVEIPPGKYVGSGVVITN
QSEADRLPDAKTTDHRFSHHVVEINRALLAGYRCADDVACTTPLNNGHRSETARPQTDRLQEQLSAEVLEQILGQLRLGN
QIGIEQADARHFKVGSWQSCPPLEGTYPQQVLDSLNRRMTEYQGNAVRVFSIDSHKQRVMEWLLQRPIPS
>Mature_309_residues
PLRQQPSPPTPWDRGLDQPQIHESAYVHPSTSLIGDVRLGHQVLIAPGTSIRADEGMPFYIGGNTNIQDGVVIHGLERGR
VTGDDGESYSVWIGEHTCITHMALIHGPAYIGDDCFIGFRSTVFNAKVGHRCIVMMHALIQDVEIPPGKYVGSGVVITNQ
SEADRLPDAKTTDHRFSHHVVEINRALLAGYRCADDVACTTPLNNGHRSETARPQTDRLQEQLSAEVLEQILGQLRLGNQ
IGIEQADARHFKVGSWQSCPPLEGTYPQQVLDSLNRRMTEYQGNAVRVFSIDSHKQRVMEWLLQRPIPS

Specific function: The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator [H]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:
GO:0015977: Carbon dioxide concentrating mechanism protein CcmM
GO:0016740: Carbon dioxide concentrating mechanism protein CcmM
GO:0016984: Carbon dioxide concentrating mechanism protein CcmM

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87081681, Length=124, Percent_Identity=34.6774193548387, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787667, Length=173, Percent_Identity=30.635838150289, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017156
- InterPro:   IPR000894
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 34419; Mature: 34288

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRQQPSPPTPWDRGLDQPQIHESAYVHPSTSLIGDVRLGHQVLIAPGTSIRADEGMPF
CCCCCCCCCCCCHHCCCCCCCCCCCEEECCCHHHHEEEECCCEEEEECCCCEECCCCCEE
YIGGNTNIQDGVVIHGLERGRVTGDDGESYSVWIGEHTCITHMALIHGPAYIGDDCFIGF
EECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEECCCEEEEH
RSTVFNAKVGHRCIVMMHALIQDVEIPPGKYVGSGVVITNQSEADRLPDAKTTDHRFSHH
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHH
VVEINRALLAGYRCADDVACTTPLNNGHRSETARPQTDRLQEQLSAEVLEQILGQLRLGN
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QIGIEQADARHFKVGSWQSCPPLEGTYPQQVLDSLNRRMTEYQGNAVRVFSIDSHKQRVM
CCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
EWLLQRPIPS
HHHHHCCCCC
>Mature Secondary Structure 
PLRQQPSPPTPWDRGLDQPQIHESAYVHPSTSLIGDVRLGHQVLIAPGTSIRADEGMPF
CCCCCCCCCCCHHCCCCCCCCCCCEEECCCHHHHEEEECCCEEEEECCCCEECCCCCEE
YIGGNTNIQDGVVIHGLERGRVTGDDGESYSVWIGEHTCITHMALIHGPAYIGDDCFIGF
EECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEECCCEEEEH
RSTVFNAKVGHRCIVMMHALIQDVEIPPGKYVGSGVVITNQSEADRLPDAKTTDHRFSHH
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHH
VVEINRALLAGYRCADDVACTTPLNNGHRSETARPQTDRLQEQLSAEVLEQILGQLRLGN
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QIGIEQADARHFKVGSWQSCPPLEGTYPQQVLDSLNRRMTEYQGNAVRVFSIDSHKQRVM
CCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
EWLLQRPIPS
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pre-cofactor [C]

Specific reaction: pre-cofactor = cofactor [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]