| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is malE [C]
Identifier: 158336096
GI number: 158336096
Start: 2986717
End: 2988153
Strand: Direct
Name: malE [C]
Synonym: AM1_2958
Alternate gene names: 158336096
Gene position: 2986717-2988153 (Clockwise)
Preceding gene: 158336093
Following gene: 158336098
Centisome position: 45.92
GC content: 52.19
Gene sequence:
>1437_bases TTGGTATCGGATTTACCCTTCTTTACCTTAATCGTTGGCAGACAGCTTGCCTACCATCGGATTTTGATTTTTACTCACGG GGGATCTAGAGTGATGAGAACGCCTGCTGAGGGACTCATCAACATGAACATGCGATCACCGCAACTCTGGCGCACCCTAA ATCCGTTCCATCGCCTTTCCAAGCGACTGCGCTTTATGGTGCTGAGTTTGCTGGTTTGCTTGAGCGTCATCGGGGGCTAT TGGGTGTGGGCTCAACAGCCCGTTCGCCTATCCATGATGCTCCAGGGTCAGGAAATTCCTAACTGGCAGCTGATTGTTGA TGATTTTGAAGCCCAAAACCCCGATATCAAGATTGACCTGATTGAAGGCCCCAACGCCACCAATCTTCGAGAAGATCTCT ATACCACGTCTTTTCTGCTGGGCGATTCCCCCTACGACTTGATCTATATGGATATCGTCTGGGCCCCCAAATTCGCTGCT GCGGGATGGCTGTTAGACCTGTCTGATCGCATTTCTGATGAAGAACTCGCTGAATTTATGACCGGCGACGTGGATGGGGG ACGCTATGAAGGGGGGCTGTATCGGATGCCCTTCCGCTCCGATGGCGGCATGCTCTACTATCGGCAGGATTTGCTATCTG AGGCTGGCTTTGAACCACCTGAAACCACGGCTGAACTGATCGACATTTCCAAAGCTCTGCAATCTCAAAACAAAGCCCAG TGGGGGTATGTCTGGCAGGGCAAGCAGTACGAAGGGGCGGCAGCCATGTTTGTGGAAATGCTGGAAGGCTTTGGTGGCTA CTGGGTCAATCCTGAAACCAAAGAGGTGGGACTCGATAGTCCAGAAGCTATTGAGTCCCTGAAATTTCTGCAAACCACTG TTGCCGATAAAATTTCTCCTCCAGGAACAACTGCCACGGATGAAGAAGTGGCTCGCCTCCAGTTCCAAAGTGGCAACACA GTGTTTATGCGCAACTGGCCCTATGCTTGGAAACTCGGCAACACCGAACCAAGCTCCAAAATCCAAGGCAAGTTTGGGAT TAAGCCCATGGTCCATACCGCAGGGCTGGGGAGCGGTGCCTGCCAAGGGGGCTGGGGTGTCGGCATCTCGAAAACCACGC GTCATGCCGATGAAGCCTGGCGGGCCGTCGAATACTTTAGCAGCACAGAAGCCCAGCGTAAGTTTATTTTGGCCTCTGGG TTTGTGCCCAGCCGAAAAGCGCTATTTACCGACCCCACCCTGGTCAAGGAATATGAGTATTTACCTGACTTACAGAAGGT GATTGAGAGCTCTGTATTGCGTCCGCCCATTGCCCAATATGCTCAGGCCTCCGATATTTTACAGCGCTATCTCAGCGCAG CCTTAACAGGACGGCAAACCCCTGAGAAAGCCATGCAAGCTGCGGCCCAGGAAACCCGACAGCTATTAAAAACCTAA
Upstream 100 bases:
>100_bases CTGGTCAATCCAGTCCGAGCGCGTCGGTTGCTGCAAAAACTTGATCGTGGGTTGCGCCCGCTCAGGAGCATCAGTGGGCA ACGTTGAGTGAGTCATCGTA
Downstream 100 bases:
>100_bases TTACCCCAACTTTTACAGGGTCAAGGCAACCCGAAATCCAATATCATTGACGCGGTTGTTGGGAGTATAGCGACTGCGAT TGGCGGCGCGACAATACCGG
Product: sugar ABC transporter solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MVSDLPFFTLIVGRQLAYHRILIFTHGGSRVMRTPAEGLINMNMRSPQLWRTLNPFHRLSKRLRFMVLSLLVCLSVIGGY WVWAQQPVRLSMMLQGQEIPNWQLIVDDFEAQNPDIKIDLIEGPNATNLREDLYTTSFLLGDSPYDLIYMDIVWAPKFAA AGWLLDLSDRISDEELAEFMTGDVDGGRYEGGLYRMPFRSDGGMLYYRQDLLSEAGFEPPETTAELIDISKALQSQNKAQ WGYVWQGKQYEGAAAMFVEMLEGFGGYWVNPETKEVGLDSPEAIESLKFLQTTVADKISPPGTTATDEEVARLQFQSGNT VFMRNWPYAWKLGNTEPSSKIQGKFGIKPMVHTAGLGSGACQGGWGVGISKTTRHADEAWRAVEYFSSTEAQRKFILASG FVPSRKALFTDPTLVKEYEYLPDLQKVIESSVLRPPIAQYAQASDILQRYLSAALTGRQTPEKAMQAAAQETRQLLKT
Sequences:
>Translated_478_residues MVSDLPFFTLIVGRQLAYHRILIFTHGGSRVMRTPAEGLINMNMRSPQLWRTLNPFHRLSKRLRFMVLSLLVCLSVIGGY WVWAQQPVRLSMMLQGQEIPNWQLIVDDFEAQNPDIKIDLIEGPNATNLREDLYTTSFLLGDSPYDLIYMDIVWAPKFAA AGWLLDLSDRISDEELAEFMTGDVDGGRYEGGLYRMPFRSDGGMLYYRQDLLSEAGFEPPETTAELIDISKALQSQNKAQ WGYVWQGKQYEGAAAMFVEMLEGFGGYWVNPETKEVGLDSPEAIESLKFLQTTVADKISPPGTTATDEEVARLQFQSGNT VFMRNWPYAWKLGNTEPSSKIQGKFGIKPMVHTAGLGSGACQGGWGVGISKTTRHADEAWRAVEYFSSTEAQRKFILASG FVPSRKALFTDPTLVKEYEYLPDLQKVIESSVLRPPIAQYAQASDILQRYLSAALTGRQTPEKAMQAAAQETRQLLKT >Mature_478_residues MVSDLPFFTLIVGRQLAYHRILIFTHGGSRVMRTPAEGLINMNMRSPQLWRTLNPFHRLSKRLRFMVLSLLVCLSVIGGY WVWAQQPVRLSMMLQGQEIPNWQLIVDDFEAQNPDIKIDLIEGPNATNLREDLYTTSFLLGDSPYDLIYMDIVWAPKFAA AGWLLDLSDRISDEELAEFMTGDVDGGRYEGGLYRMPFRSDGGMLYYRQDLLSEAGFEPPETTAELIDISKALQSQNKAQ WGYVWQGKQYEGAAAMFVEMLEGFGGYWVNPETKEVGLDSPEAIESLKFLQTTVADKISPPGTTATDEEVARLQFQSGNT VFMRNWPYAWKLGNTEPSSKIQGKFGIKPMVHTAGLGSGACQGGWGVGISKTTRHADEAWRAVEYFSSTEAQRKFILASG FVPSRKALFTDPTLVKEYEYLPDLQKVIESSVLRPPIAQYAQASDILQRYLSAALTGRQTPEKAMQAAAQETRQLLKT
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 53709; Mature: 53709
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDLPFFTLIVGRQLAYHRILIFTHGGSRVMRTPAEGLINMNMRSPQLWRTLNPFHRLS CCCCCHHHHHHHHHHHEEEEEEEEEECCCCEEECCHHHEEECCCCCCHHHHHCCHHHHHH KRLRFMVLSLLVCLSVIGGYWVWAQQPVRLSMMLQGQEIPNWQLIVDDFEAQNPDIKIDL HHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCCEEEEE IEGPNATNLREDLYTTSFLLGDSPYDLIYMDIVWAPKFAAAGWLLDLSDRISDEELAEFM ECCCCCCCHHHHHHHHHEEECCCCCCEEEEEEEECCCHHHCCEEEECHHCCCHHHHHHHH TGDVDGGRYEGGLYRMPFRSDGGMLYYRQDLLSEAGFEPPETTAELIDISKALQSQNKAQ HCCCCCCEECCCEEECCEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC WGYVWQGKQYEGAAAMFVEMLEGFGGYWVNPETKEVGLDSPEAIESLKFLQTTVADKISP CCEEECCCCCCCHHHHHHHHHHCCCCEECCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCC PGTTATDEEVARLQFQSGNTVFMRNWPYAWKLGNTEPSSKIQGKFGIKPMVHTAGLGSGA CCCCCCHHHHHHEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCC CQGGWGVGISKTTRHADEAWRAVEYFSSTEAQRKFILASGFVPSRKALFTDPTLVKEYEY CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCEECCCHHHHHHHH LPDLQKVIESSVLRPPIAQYAQASDILQRYLSAALTGRQTPEKAMQAAAQETRQLLKT CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSDLPFFTLIVGRQLAYHRILIFTHGGSRVMRTPAEGLINMNMRSPQLWRTLNPFHRLS CCCCCHHHHHHHHHHHEEEEEEEEEECCCCEEECCHHHEEECCCCCCHHHHHCCHHHHHH KRLRFMVLSLLVCLSVIGGYWVWAQQPVRLSMMLQGQEIPNWQLIVDDFEAQNPDIKIDL HHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCCEEEEE IEGPNATNLREDLYTTSFLLGDSPYDLIYMDIVWAPKFAAAGWLLDLSDRISDEELAEFM ECCCCCCCHHHHHHHHHEEECCCCCCEEEEEEEECCCHHHCCEEEECHHCCCHHHHHHHH TGDVDGGRYEGGLYRMPFRSDGGMLYYRQDLLSEAGFEPPETTAELIDISKALQSQNKAQ HCCCCCCEECCCEEECCEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC WGYVWQGKQYEGAAAMFVEMLEGFGGYWVNPETKEVGLDSPEAIESLKFLQTTVADKISP CCEEECCCCCCCHHHHHHHHHHCCCCEECCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCC PGTTATDEEVARLQFQSGNTVFMRNWPYAWKLGNTEPSSKIQGKFGIKPMVHTAGLGSGA CCCCCCHHHHHHEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCC CQGGWGVGISKTTRHADEAWRAVEYFSSTEAQRKFILASGFVPSRKALFTDPTLVKEYEY CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCEECCCHHHHHHHH LPDLQKVIESSVLRPPIAQYAQASDILQRYLSAALTGRQTPEKAMQAAAQETRQLLKT CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]