| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is tyrA [H]
Identifier: 158336081
GI number: 158336081
Start: 2974194
End: 2975030
Strand: Reverse
Name: tyrA [H]
Synonym: AM1_2942
Alternate gene names: 158336081
Gene position: 2975030-2974194 (Counterclockwise)
Preceding gene: 158336082
Following gene: 158336080
Centisome position: 45.74
GC content: 52.21
Gene sequence:
>837_bases ATGAACATTGGCATCGTTGGCCTCGGTTTAATTGGTGGTTCCTTGGCCTATGATTTCCGGGCCTTGGGATATAAAGTGCT AGGCGTGAGTCGCCAGCCCCAAACCTGCGAGGATGCGGTCAAGCTCGGAGCCGTCGATGCGGCCAGTAGCGATCTTGCTT CGCTGGCTCCCGTAGATGTTGTGTTTATCTGCACCCCGGTCAGTGTGATAGATGCGATCGCAACCCGTTTAATTCCTCAT TTGTCTCAAAATGCGATTCTCACAGATGTCGGCTCTGTCAAAGGAACAGTGGTGAAGCGCTTAACCCCTTTATGGCCTCG CTTTATTGGCGGTCACCCGATGGCAGGCAGTGAAGAAACGGGCATCCATGCAGCTCAGTCCCGGCTTTTTGCGGGCAATC CTTATATCTTGACGCCCACCCCTGAGACACCAGCCGATGTGATCGAGACGATGAGAGATCTGATCGGCCAGCTAGATTGC AATCTCTATGAATGCTCTCCTACGGTTCATGATCGGGCGGTGGCTTGGATTTCCCACCTGCCTAAAATGACCAGTGCAGC GTTAATTACTGCTTGCTTGAGTGAAGGGGATTCAGAGATTTTGAAACTCGCTCAATCTTTTGCTAGCTCCGGCTTTCGAG ATACGAGTCGCGTGGGGGGTGGCAACCCGGAACTAGGCTGCATGATGGCCCAGTACAACCGGGAAGAACTGTTGCGATCT CTCCACCAATACCGCCAAAGTCTCGATCAGCTTACAGAGGTCATAGAACGTTCAGACTGGCTGGCTTTGGAACGCTTACT GAGTCAAACTCAGACGGAACGACCTAAATTCCTGTAA
Upstream 100 bases:
>100_bases AAAGCCAACTACGAGGAATTATGGACCGTTGGCAATTTCAAGGCATCGGTATGGTAAAAGATCCTCTGATTCCCCGCATA GAGTTTATGAGTTTGGCAGG
Downstream 100 bases:
>100_bases CAGCTATCTGATAAATCTAAAGACTCTTGGAAATTGTACCGATAGTGACAATGGGATCCAACGAATACCCCTAGGCTTGT TGGAGTCTTAATATCTCCTC
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNIGIVGLGLIGGSLAYDFRALGYKVLGVSRQPQTCEDAVKLGAVDAASSDLASLAPVDVVFICTPVSVIDAIATRLIPH LSQNAILTDVGSVKGTVVKRLTPLWPRFIGGHPMAGSEETGIHAAQSRLFAGNPYILTPTPETPADVIETMRDLIGQLDC NLYECSPTVHDRAVAWISHLPKMTSAALITACLSEGDSEILKLAQSFASSGFRDTSRVGGGNPELGCMMAQYNREELLRS LHQYRQSLDQLTEVIERSDWLALERLLSQTQTERPKFL
Sequences:
>Translated_278_residues MNIGIVGLGLIGGSLAYDFRALGYKVLGVSRQPQTCEDAVKLGAVDAASSDLASLAPVDVVFICTPVSVIDAIATRLIPH LSQNAILTDVGSVKGTVVKRLTPLWPRFIGGHPMAGSEETGIHAAQSRLFAGNPYILTPTPETPADVIETMRDLIGQLDC NLYECSPTVHDRAVAWISHLPKMTSAALITACLSEGDSEILKLAQSFASSGFRDTSRVGGGNPELGCMMAQYNREELLRS LHQYRQSLDQLTEVIERSDWLALERLLSQTQTERPKFL >Mature_278_residues MNIGIVGLGLIGGSLAYDFRALGYKVLGVSRQPQTCEDAVKLGAVDAASSDLASLAPVDVVFICTPVSVIDAIATRLIPH LSQNAILTDVGSVKGTVVKRLTPLWPRFIGGHPMAGSEETGIHAAQSRLFAGNPYILTPTPETPADVIETMRDLIGQLDC NLYECSPTVHDRAVAWISHLPKMTSAALITACLSEGDSEILKLAQSFASSGFRDTSRVGGGNPELGCMMAQYNREELLRS LHQYRQSLDQLTEVIERSDWLALERLLSQTQTERPKFL
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 30063; Mature: 30063
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGIVGLGLIGGSLAYDFRALGYKVLGVSRQPQTCEDAVKLGAVDAASSDLASLAPVDV CCCEEEEHHHHCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHE VFICTPVSVIDAIATRLIPHLSQNAILTDVGSVKGTVVKRLTPLWPRFIGGHPMAGSEET EEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GIHAAQSRLFAGNPYILTPTPETPADVIETMRDLIGQLDCNLYECSPTVHDRAVAWISHL CHHHHHHHEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH PKMTSAALITACLSEGDSEILKLAQSFASSGFRDTSRVGGGNPELGCMMAQYNREELLRS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHCCHHHHHHH LHQYRQSLDQLTEVIERSDWLALERLLSQTQTERPKFL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNIGIVGLGLIGGSLAYDFRALGYKVLGVSRQPQTCEDAVKLGAVDAASSDLASLAPVDV CCCEEEEHHHHCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHE VFICTPVSVIDAIATRLIPHLSQNAILTDVGSVKGTVVKRLTPLWPRFIGGHPMAGSEET EEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GIHAAQSRLFAGNPYILTPTPETPADVIETMRDLIGQLDCNLYECSPTVHDRAVAWISHL CHHHHHHHEECCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH PKMTSAALITACLSEGDSEILKLAQSFASSGFRDTSRVGGGNPELGCMMAQYNREELLRS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHCCHHHHHHH LHQYRQSLDQLTEVIERSDWLALERLLSQTQTERPKFL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]