| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335953
Identifier: 158335953
GI number: 158335953
Start: 2849156
End: 2849899
Strand: Direct
Name: 158335953
Synonym: AM1_2811
Alternate gene names: NA
Gene position: 2849156-2849899 (Clockwise)
Preceding gene: 158335952
Following gene: 158335956
Centisome position: 43.81
GC content: 51.75
Gene sequence:
>744_bases ATGAACAACATTAATAAACATCCATCTCAAACGATTGGCCTCGCCATCACCCTAGCGGGTGTTATGCACACACTGCCCCT ACACGCCGCGCAACTCAACTTTGATCAATCAGAAACCGAGGGCAGTCTAACAATACCCAACGCTATTAGTAATTGCACCC AAGAGTCTGATCCAAATTTGACATCCCAGTCTAATCCAGAGATCTCCAATCCATCCCAAACCTTGACACTGGGCTCCACT CTTATTGCTGACAATCGTGCCACGGCAAATGATGCTGGTTTGTTCACGTCCGAATCATCCTTAGTCGCTCAATCGGTCAT AGATGATTGCTGTGTTGTTGGAGACACAGCAATTGGTGGCCCTTCTGCTTTTGAAGATGCTGCATTATGCGGTCTGGGTG GCGTACCTCCAACCGGGGGGGCTGCACCGGGTGGCTTTCCTTTTCCTGTACTAGCCGCTTTAGCACCAGCAGCAGCTGTT CCCTTGATCGCAACAGGTGGAGATCCAGAACCCACTCCAACACCAACACCTACTCCAACGCCGACACCCACACCTACTCC AACGCCGACACCCACTCCTACTCCAACGCCGACACCCACACCTACTCCTACCCCGACACCCACTCCAACACCGCCTCCCA CCAAGCCTCCAGAAAAAGTACCTGAGCCATCTACAATGGCTGGACTGCTGATTGGCGGTGCTATCTTCGGCATCTACAAA CGGAGAAAGAAATCAAAAGACTAG
Upstream 100 bases:
>100_bases TCAACACCTCAAACAACAGCTGGCTCCTTCGAGGTCCGTCCCTTGATCCAGCTATAGCTCTTCTTCAGATTGATCCTGGG GAAATAGGGAGTAAACGCAA
Downstream 100 bases:
>100_bases TGACGCCAGCTTGACTCCTTAAGCAAATAGCGACGGCCTAAAAAGACCGTCGCTATTTGCTCAAATTCAGCTAGGTAGTA TTGAATCTGCCTATTTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNNINKHPSQTIGLAITLAGVMHTLPLHAAQLNFDQSETEGSLTIPNAISNCTQESDPNLTSQSNPEISNPSQTLTLGST LIADNRATANDAGLFTSESSLVAQSVIDDCCVVGDTAIGGPSAFEDAALCGLGGVPPTGGAAPGGFPFPVLAALAPAAAV PLIATGGDPEPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPPPTKPPEKVPEPSTMAGLLIGGAIFGIYK RRKKSKD
Sequences:
>Translated_247_residues MNNINKHPSQTIGLAITLAGVMHTLPLHAAQLNFDQSETEGSLTIPNAISNCTQESDPNLTSQSNPEISNPSQTLTLGST LIADNRATANDAGLFTSESSLVAQSVIDDCCVVGDTAIGGPSAFEDAALCGLGGVPPTGGAAPGGFPFPVLAALAPAAAV PLIATGGDPEPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPPPTKPPEKVPEPSTMAGLLIGGAIFGIYK RRKKSKD >Mature_247_residues MNNINKHPSQTIGLAITLAGVMHTLPLHAAQLNFDQSETEGSLTIPNAISNCTQESDPNLTSQSNPEISNPSQTLTLGST LIADNRATANDAGLFTSESSLVAQSVIDDCCVVGDTAIGGPSAFEDAALCGLGGVPPTGGAAPGGFPFPVLAALAPAAAV PLIATGGDPEPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPPPTKPPEKVPEPSTMAGLLIGGAIFGIYK RRKKSKD
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24901; Mature: 24901
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNINKHPSQTIGLAITLAGVMHTLPLHAAQLNFDQSETEGSLTIPNAISNCTQESDPNL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHCCCCCCCC TSQSNPEISNPSQTLTLGSTLIADNRATANDAGLFTSESSLVAQSVIDDCCVVGDTAIGG CCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCC PSAFEDAALCGLGGVPPTGGAAPGGFPFPVLAALAPAAAVPLIATGGDPEPTPTPTPTPT CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPPPTKPPEKVPEPSTMAGLLIGGAIFGIYK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RRKKSKD HHHCCCC >Mature Secondary Structure MNNINKHPSQTIGLAITLAGVMHTLPLHAAQLNFDQSETEGSLTIPNAISNCTQESDPNL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHCCCCCCCC TSQSNPEISNPSQTLTLGSTLIADNRATANDAGLFTSESSLVAQSVIDDCCVVGDTAIGG CCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCC PSAFEDAALCGLGGVPPTGGAAPGGFPFPVLAALAPAAAVPLIATGGDPEPTPTPTPTPT CCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPPPTKPPEKVPEPSTMAGLLIGGAIFGIYK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RRKKSKD HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA