Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is uidR [C]

Identifier: 158335929

GI number: 158335929

Start: 2819109

End: 2819735

Strand: Direct

Name: uidR [C]

Synonym: AM1_2787

Alternate gene names: 158335929

Gene position: 2819109-2819735 (Clockwise)

Preceding gene: 158335926

Following gene: 158335931

Centisome position: 43.35

GC content: 46.09

Gene sequence:

>627_bases
ATGAGTCCCAAAATTGTTGACCGAGAAGCTAAACGCCAAGCGATTCTGGCTGCTGCGATCGCAGTCTTCGCCGAAAAAGG
GTATCACGCCACCAAAATGGCCGACATTGCCCGCAAAGCTGAGATGGGCAAAGGTACCCTTTATGAGTATTTCCGCACCA
AGGAAGAACTGCCCAAAAGCATTTTTGGCCTGATGCTCGAAGCATTCGATCAGGAAATTTCGCAACTAGAGCAGGCCCAT
GCTGATCCTGTAGACGCCATCATGGCCGGGATTCAACTCTGTTTTCAGGATCTGGATGAATTTGCTTATGTCACTCCTTT
AGTCTTCGAAATTCTAGGTAATAAGGATCTGGATCGATCGATTGGGTTAAGTGAAGATTTTAAACAATGGCTGGAGGGCA
TCAATCAGTTCTTTATTGCTCAGATTCAAGCCGGTCAAGCTCAAGGGAAGATCTCGTCAAAGCTCTCTGCCCCAATTTTT
GCCCGCATGCTAGTGAGCATCTTAGATGGCATGGCAACCCATTATTGTATGTTTCACTTTCAACCTGATTTTTTTATGGC
TCAGGTTAAAGCCTTGGAGGATATGGTGTGCTCCTATCTAGTCTCCTCAATCGGGGACAAGCAATAA

Upstream 100 bases:

>100_bases
TAGTGACGATACCTTTATATTGACCGACCAGTCGGTCAAATGTCAAGTCGAAAGATGAAAGCTCTACAGTAAAAGACGCA
GGAACCGCTATGATGACGCC

Downstream 100 bases:

>100_bases
CAATTAACCATATCGATTCTTTTCAGGTTGGCTTTCAGCGGCCAAGCAGAAAAGTAAGACTAGACCGCCTATCATTGGGA
CAAAGTTTACAAATAGCCAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family Domain Protein

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSPKIVDREAKRQAILAAAIAVFAEKGYHATKMADIARKAEMGKGTLYEYFRTKEELPKSIFGLMLEAFDQEISQLEQAH
ADPVDAIMAGIQLCFQDLDEFAYVTPLVFEILGNKDLDRSIGLSEDFKQWLEGINQFFIAQIQAGQAQGKISSKLSAPIF
ARMLVSILDGMATHYCMFHFQPDFFMAQVKALEDMVCSYLVSSIGDKQ

Sequences:

>Translated_208_residues
MSPKIVDREAKRQAILAAAIAVFAEKGYHATKMADIARKAEMGKGTLYEYFRTKEELPKSIFGLMLEAFDQEISQLEQAH
ADPVDAIMAGIQLCFQDLDEFAYVTPLVFEILGNKDLDRSIGLSEDFKQWLEGINQFFIAQIQAGQAQGKISSKLSAPIF
ARMLVSILDGMATHYCMFHFQPDFFMAQVKALEDMVCSYLVSSIGDKQ
>Mature_207_residues
SPKIVDREAKRQAILAAAIAVFAEKGYHATKMADIARKAEMGKGTLYEYFRTKEELPKSIFGLMLEAFDQEISQLEQAHA
DPVDAIMAGIQLCFQDLDEFAYVTPLVFEILGNKDLDRSIGLSEDFKQWLEGINQFFIAQIQAGQAQGKISSKLSAPIFA
RMLVSILDGMATHYCMFHFQPDFFMAQVKALEDMVCSYLVSSIGDKQ

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23309; Mature: 23178

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKIVDREAKRQAILAAAIAVFAEKGYHATKMADIARKAEMGKGTLYEYFRTKEELPKS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IFGLMLEAFDQEISQLEQAHADPVDAIMAGIQLCFQDLDEFAYVTPLVFEILGNKDLDRS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IGLSEDFKQWLEGINQFFIAQIQAGQAQGKISSKLSAPIFARMLVSILDGMATHYCMFHF
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPDFFMAQVKALEDMVCSYLVSSIGDKQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPKIVDREAKRQAILAAAIAVFAEKGYHATKMADIARKAEMGKGTLYEYFRTKEELPKS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IFGLMLEAFDQEISQLEQAHADPVDAIMAGIQLCFQDLDEFAYVTPLVFEILGNKDLDRS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IGLSEDFKQWLEGINQFFIAQIQAGQAQGKISSKLSAPIFARMLVSILDGMATHYCMFHF
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPDFFMAQVKALEDMVCSYLVSSIGDKQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA