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The map label for this gene is 158335871

Identifier: 158335871

GI number: 158335871

Start: 2763210

End: 2763902

Strand: Reverse

Name: 158335871

Synonym: AM1_2729

Alternate gene names: NA

Gene position: 2763902-2763210 (Counterclockwise)

Preceding gene: 158335874

Following gene: 158335870

Centisome position: 42.5

GC content: 50.65

Gene sequence:

>693_bases
GTGGTACCCCTACGCGATAATAACCCCACTCGAATTACACCCTTTGTTACCTATGTTCTGATTGCCCTCAATATTGTCGT
CTTCCTGCATGAGTTGCGCTTGGGGCCAGAACTAGACGCCTTTTTCCGCTTGTGGGCGGTGGTTCCCCGAGAATTGACCG
CGAGTTTCCAAGGAGAACCCACGACCTTGCCTCATCCCGCCTGGATTACTTTGTTTACCTCTCAGTTCCTGCACGGGGGA
ATTTTGCATATTGCCGGGAATATGCTGTTCCTGTGGGTGTTCGGGAATAATATTGAGGACAAACTGGGCCATGTCAAATA
TCTGGTGTTTTACCTCAGCTGTGGAGCTTTAGCGGCCCTCAGTCAATGGTTTTTTAGCGTCAATTCTGAAATTCCGTCTT
TAGGGGCCAGTGGTGCAATTGCAGGGGTGATGGGGGCCTATATTATTCGCTTCCCCAAAGCGGAGGTCTTAACCCTAATT
CCCTTAGGGTTTTTCTGGTGGACGGTTAATCTGCCTGCCGTGTTCTTTTTAGGATTCTGGTTTGCCCAGCAAGCTTTTAA
TAGCGTCGCTAGCCTCAATGCCCCCATGAATATGGGCGGGGTAGCCTATTGGGCTCATGCCGGGGGCTTTGTGTTTGGGG
CCTTGCTAGGTCCACTGATGGGACTGTTTGATCATGATCAGTCCCGCCGTTAA

Upstream 100 bases:

>100_bases
AAATCGCTAATCCTGGTCAGACCCATCGCTTAGCTCAGGAGAGCGACTTGGCCCCATGTAGAGAATAGTGCACTTTTAGT
GGAATCGATCAAAAAAAACT

Downstream 100 bases:

>100_bases
CGTGTGAGTGTAAAGCTGCTTGTATGGTGAATATTGCTCAATCTGTGAAACTGATGGGGCTGATCGGTTGCTCGTCTCTG
TTGGTGAACTGTACCCTGTT

Product: rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Serine Protease; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR; Rhomboid Protease

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MVPLRDNNPTRITPFVTYVLIALNIVVFLHELRLGPELDAFFRLWAVVPRELTASFQGEPTTLPHPAWITLFTSQFLHGG
ILHIAGNMLFLWVFGNNIEDKLGHVKYLVFYLSCGALAALSQWFFSVNSEIPSLGASGAIAGVMGAYIIRFPKAEVLTLI
PLGFFWWTVNLPAVFFLGFWFAQQAFNSVASLNAPMNMGGVAYWAHAGGFVFGALLGPLMGLFDHDQSRR

Sequences:

>Translated_230_residues
MVPLRDNNPTRITPFVTYVLIALNIVVFLHELRLGPELDAFFRLWAVVPRELTASFQGEPTTLPHPAWITLFTSQFLHGG
ILHIAGNMLFLWVFGNNIEDKLGHVKYLVFYLSCGALAALSQWFFSVNSEIPSLGASGAIAGVMGAYIIRFPKAEVLTLI
PLGFFWWTVNLPAVFFLGFWFAQQAFNSVASLNAPMNMGGVAYWAHAGGFVFGALLGPLMGLFDHDQSRR
>Mature_230_residues
MVPLRDNNPTRITPFVTYVLIALNIVVFLHELRLGPELDAFFRLWAVVPRELTASFQGEPTTLPHPAWITLFTSQFLHGG
ILHIAGNMLFLWVFGNNIEDKLGHVKYLVFYLSCGALAALSQWFFSVNSEIPSLGASGAIAGVMGAYIIRFPKAEVLTLI
PLGFFWWTVNLPAVFFLGFWFAQQAFNSVASLNAPMNMGGVAYWAHAGGFVFGALLGPLMGLFDHDQSRR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25508; Mature: 25508

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPLRDNNPTRITPFVTYVLIALNIVVFLHELRLGPELDAFFRLWAVVPRELTASFQGEP
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
TTLPHPAWITLFTSQFLHGGILHIAGNMLFLWVFGNNIEDKLGHVKYLVFYLSCGALAAL
CCCCCCHHHHHHHHHHHHCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
SQWFFSVNSEIPSLGASGAIAGVMGAYIIRFPKAEVLTLIPLGFFWWTVNLPAVFFLGFW
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQQAFNSVASLNAPMNMGGVAYWAHAGGFVFGALLGPLMGLFDHDQSRR
HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVPLRDNNPTRITPFVTYVLIALNIVVFLHELRLGPELDAFFRLWAVVPRELTASFQGEP
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
TTLPHPAWITLFTSQFLHGGILHIAGNMLFLWVFGNNIEDKLGHVKYLVFYLSCGALAAL
CCCCCCHHHHHHHHHHHHCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
SQWFFSVNSEIPSLGASGAIAGVMGAYIIRFPKAEVLTLIPLGFFWWTVNLPAVFFLGFW
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQQAFNSVASLNAPMNMGGVAYWAHAGGFVFGALLGPLMGLFDHDQSRR
HHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA