Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is yedW [C]

Identifier: 158335817

GI number: 158335817

Start: 2710221

End: 2710688

Strand: Direct

Name: yedW [C]

Synonym: AM1_2670

Alternate gene names: 158335817

Gene position: 2710221-2710688 (Clockwise)

Preceding gene: 158335816

Following gene: 158335818

Centisome position: 41.67

GC content: 42.52

Gene sequence:

>468_bases
ATGCCAGTCTTAGATGGATATCAAGCAGCTCAACAAATCAAAACCCAACCTCAACCGCCTATTATTATCGCCTTGACTGC
TAATGCTTTTGAGGAAGACCGTAGCAAAGCCTTAGCTAGTGGCTGTGACGATTATGTACGTAAGCCCTATAAGGAATCGA
TCATTTGGGAAAAGCTGGCCGAGCATTTAGGGGTCCAATATCTTTACGCTGAAATTCAGAATGATGAAAGTTGTATTGAT
GACTTTGGCTTAACTGCAGCTATTTTGCTCGCTATCTCTAGTCCGTGGCTTCAGAAGTTGCATGCTGCGGTGATTGAACT
AAATTCGAATCAGGTTGATCAATTATTAACTGAGATTCCTAAAGAGCATCGTCGATTGAAATTAGCTATTTCTGAGCTGG
CACAACAGTTTCGCTATGACGTACTCATGAACCTAACTCAAATGGCCCTGGAAGACCAGCCTAGCTAA

Upstream 100 bases:

>100_bases
GGAATTAGTGGGATGCGAGGTTTGAGCCGTCAGTAATGGTCAAGATGCTGTAAATCAGTCAGAGCAATGGCAACCTGATT
TAATTTGGTTAGATTTACGT

Downstream 100 bases:

>100_bases
ACAAAGGTCGATTTACTTCAGTCGCTGCTGCTGGGGATACCTTTATCGGCGCTGTTGTTGGGAGCTGCGCGGAGCGTACT
GCTGGAGCAGGACCCCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Two-Component Hybrid Sensor And Regulator; PAS Fold Family; Two-Component Hybrid Sensor And Regulator Histidine Kinase; Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; Two-Component Hybrid Histidine Kinase Sensor And Regulator; ATPase Histidine Kinase- DNA Gyrase B- And; Response Regulator Receiver Domain Protein; Two-Component Hybrid Sensory Histidine Kinase; Two-Component Hybrid Histidine Kinase; GAF Domain Protein; Hybrid Sensory Kinase; PAS/PAC Sensor Hybrid Histidine Kinase

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLAEHLGVQYLYAEIQNDESCID
DFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIPKEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS

Sequences:

>Translated_155_residues
MPVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLAEHLGVQYLYAEIQNDESCID
DFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIPKEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS
>Mature_154_residues
PVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLAEHLGVQYLYAEIQNDESCIDD
FGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIPKEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS

Specific function: Probable Member Of A Two-Component Regulatory System Yedw/Yedv. [C]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17525; Mature: 17394

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLA
CCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHH
EHLGVQYLYAEIQNDESCIDDFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PVLDGYQAAQQIKTQPQPPIIIALTANAFEEDRSKALASGCDDYVRKPYKESIIWEKLA
CCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHH
EHLGVQYLYAEIQNDESCIDDFGLTAAILLAISSPWLQKLHAAVIELNSNQVDQLLTEIP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KEHRRLKLAISELAQQFRYDVLMNLTQMALEDQPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA