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The map label for this gene is yejH [C]

Identifier: 158335611

GI number: 158335611

Start: 2478465

End: 2479937

Strand: Reverse

Name: yejH [C]

Synonym: AM1_2461

Alternate gene names: 158335611

Gene position: 2479937-2478465 (Counterclockwise)

Preceding gene: 158335615

Following gene: 158335610

Centisome position: 38.13

GC content: 50.92

Gene sequence:

>1473_bases
ATGGTGCGTAAGCCAACCTTAACCTACGATCGCGGCACGCTTATTTTGCACCCTCCGCCTAAGGGAAAAGATTGGTTGGA
CTATGCCACCTGGGATGATCGGGTAGAGCGATTCCGGGTCCCTGCGATCGCATACCGTTCCTTACTAACCGCAACGCAAA
TCACTGATCCGCGTCTGGTGGATCAAGCCAAATCCTATGAGGCTTTGGAACTGACCCCCAGTCTACAAATGGAGCCTTAT
CGCCATCAGCAAGAGGCGCTAGACGCTTGGCAGGAAAACCGTCGAGGGGTTGTGGTTTTACCGACCGCTGCAGGCAAGAC
CTATTTGGCCCAATTGGTGATTCAGGCCACCCAACGCAGTACGTTAATCGCGGTTCCAACGCTGGATTTAATGCACCAGT
GGTATGCCCATTTGGTGGCTGCTTTCCCCGATGCTGAAATTGGTTTATTGGGCGGTGGATCTCGCGATCGTACCCCAATT
CTGATTTCCACTTACGATAGTGCTGCCATCCAGGCTGAAAACCTGGGCAATCGCTATGGTCTACTAGTATTCGACGAATG
CCACCATTTACCCAGCAGCTTTAATCGGGTGATTGCTGAATATGCCATTGCGCCCTATCGGTTGGGACTCACCGCTACCC
CAGAACGGAGCGACGGTAAGCATGAGGATTTAGATAATCTAATTGGTCCGACCGTGTATCGCCGAACGGCTGAAGAACTG
TCTGGCGTCGCCTTAGCCAAACATAAAACCGTCCAAATTCAGGTCAAGCTCTCCACCCAAGAACGAGAGCGATACGACGA
GCTGATTCAAACTCGTAACCAGTTTCTCCAATCTGCTCGTATTTTTCTGGGTAGCTTAAAGGGGTGGCAACAGTTTGTGC
GTGAAAGTGCTCGCTCCAAAGCAGGACGAAGAGCCATGTTAGCCCATCGTCAGGCCCGTGCGATCGCATTCGGTACTGAA
GGCAAACTCCGTATCCTCGCCGATCTCTTAGCTCAGCACCACCCCGAACAAACCCTTATCTTTACCGACGACAACGCCAC
CGTCTATCGAATTTCCCAAGATTTTCTTATTCCAGCCATTACCCATAAAACACCCGTCAAAGAGCGCCACGATATTTTGC
AGCGGTTTCGCTCCGGCGACTATCCCACCCTAGTAGCCTCACGTGTTCTGAATGAAGGCGTCGATGTGCCAGAAGCAAGT
ATTGCCATTGTCCTATCAGGGACTGGCTCTACCCGAGAATATGTACAGCGCTTAGGAAGAGTGCTTCGTAAAGGCAAAGA
TCCCGATAAATTGGCTTTACTGTATGAGGTGATTGCCGAGAATACCAGTGAAGAGAATACAGCCCGTCGTCGTCAACCGA
CCCGGAGTAAACCGAAACTATCTGTCGTGTCCAAGTCGTATGAGTTAAATGACGTCCCTATACCTCGGGCTGCAGAGAGC
AAAAACAAAGGATCTCAATCCTTTGATGAGTGA

Upstream 100 bases:

>100_bases
GTAACCTCTGCGAACAAAGGATGCTCACCGTTGCCGATACTCTGCTGGTAAGTTGGAATAAGGGTACTCAACCATAAAAC
AGCTTATCTAGGCATTTTCA

Downstream 100 bases:

>100_bases
TATCTCCTACTGAAGCCAGAACTGAAGGTCGGTGTTTGCTCCACCCCTTATGAGATCATGGGCACAAAACAATTTTAAAA
GGAAGTCGGTGATGAGCTTG

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; Helicase Domain-Containing Protein; Helicase Domain Protein; ATP-Dependent DNA Helicase; Type III Restriction Res Subunit Family; DNA Repair Helicase RAD; DNA Repair Helicase Rad; Helicase; DNA Repair Protein Rad; Superfamily II DNA/RNA Helicase; DNA Helicase; DNA Repair Protein; DNA Repair Protein RAD; DNA/RNA Helicase; DNA/RNA Helicase Superfamily II; Helicase-Like Protein; Helicase Protein; ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily II; DNA/RNA Repair Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; Helicase DNA Repair; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; ATP-Dependet DEAD/DEAH Box Helicase; DEAD/DEAH Box Helicase-Like; DNA-Helicase; Nucleic Acid ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily Protein II; DEAD/DEAH Box Helicase; Helicase ATP-Dependent; Type III Restriction- System Subunit Res; DNA Or RNA Helicase; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; Restriction; Restriction Endonuclease Family Protein; Helicase ATP-Dependent Intein-Containing; DNA-Repair Protein; RNA Polymerase Sigma

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MVRKPTLTYDRGTLILHPPPKGKDWLDYATWDDRVERFRVPAIAYRSLLTATQITDPRLVDQAKSYEALELTPSLQMEPY
RHQQEALDAWQENRRGVVVLPTAAGKTYLAQLVIQATQRSTLIAVPTLDLMHQWYAHLVAAFPDAEIGLLGGGSRDRTPI
LISTYDSAAIQAENLGNRYGLLVFDECHHLPSSFNRVIAEYAIAPYRLGLTATPERSDGKHEDLDNLIGPTVYRRTAEEL
SGVALAKHKTVQIQVKLSTQERERYDELIQTRNQFLQSARIFLGSLKGWQQFVRESARSKAGRRAMLAHRQARAIAFGTE
GKLRILADLLAQHHPEQTLIFTDDNATVYRISQDFLIPAITHKTPVKERHDILQRFRSGDYPTLVASRVLNEGVDVPEAS
IAIVLSGTGSTREYVQRLGRVLRKGKDPDKLALLYEVIAENTSEENTARRRQPTRSKPKLSVVSKSYELNDVPIPRAAES
KNKGSQSFDE

Sequences:

>Translated_490_residues
MVRKPTLTYDRGTLILHPPPKGKDWLDYATWDDRVERFRVPAIAYRSLLTATQITDPRLVDQAKSYEALELTPSLQMEPY
RHQQEALDAWQENRRGVVVLPTAAGKTYLAQLVIQATQRSTLIAVPTLDLMHQWYAHLVAAFPDAEIGLLGGGSRDRTPI
LISTYDSAAIQAENLGNRYGLLVFDECHHLPSSFNRVIAEYAIAPYRLGLTATPERSDGKHEDLDNLIGPTVYRRTAEEL
SGVALAKHKTVQIQVKLSTQERERYDELIQTRNQFLQSARIFLGSLKGWQQFVRESARSKAGRRAMLAHRQARAIAFGTE
GKLRILADLLAQHHPEQTLIFTDDNATVYRISQDFLIPAITHKTPVKERHDILQRFRSGDYPTLVASRVLNEGVDVPEAS
IAIVLSGTGSTREYVQRLGRVLRKGKDPDKLALLYEVIAENTSEENTARRRQPTRSKPKLSVVSKSYELNDVPIPRAAES
KNKGSQSFDE
>Mature_490_residues
MVRKPTLTYDRGTLILHPPPKGKDWLDYATWDDRVERFRVPAIAYRSLLTATQITDPRLVDQAKSYEALELTPSLQMEPY
RHQQEALDAWQENRRGVVVLPTAAGKTYLAQLVIQATQRSTLIAVPTLDLMHQWYAHLVAAFPDAEIGLLGGGSRDRTPI
LISTYDSAAIQAENLGNRYGLLVFDECHHLPSSFNRVIAEYAIAPYRLGLTATPERSDGKHEDLDNLIGPTVYRRTAEEL
SGVALAKHKTVQIQVKLSTQERERYDELIQTRNQFLQSARIFLGSLKGWQQFVRESARSKAGRRAMLAHRQARAIAFGTE
GKLRILADLLAQHHPEQTLIFTDDNATVYRISQDFLIPAITHKTPVKERHDILQRFRSGDYPTLVASRVLNEGVDVPEAS
IAIVLSGTGSTREYVQRLGRVLRKGKDPDKLALLYEVIAENTSEENTARRRQPTRSKPKLSVVSKSYELNDVPIPRAAES
KNKGSQSFDE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4557563, Length=411, Percent_Identity=25.7907542579075, Blast_Score=106, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17556358, Length=417, Percent_Identity=27.0983213429257, Blast_Score=122, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6322048, Length=412, Percent_Identity=25, Blast_Score=117, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55235; Mature: 55235

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRKPTLTYDRGTLILHPPPKGKDWLDYATWDDRVERFRVPAIAYRSLLTATQITDPRLV
CCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH
DQAKSYEALELTPSLQMEPYRHQQEALDAWQENRRGVVVLPTAAGKTYLAQLVIQATQRS
HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC
TLIAVPTLDLMHQWYAHLVAAFPDAEIGLLGGGSRDRTPILISTYDSAAIQAENLGNRYG
EEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCHHEEHHHCCCEEE
LLVFDECHHLPSSFNRVIAEYAIAPYRLGLTATPERSDGKHEDLDNLIGPTVYRRTAEEL
EEEEHHHHCCHHHHHHHHHHHHCCCEEECCEECCCCCCCCHHHHHHHHCHHHHHHHHHHH
SGVALAKHKTVQIQVKLSTQERERYDELIQTRNQFLQSARIFLGSLKGWQQFVRESARSK
CCEEEEECEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRRAMLAHRQARAIAFGTEGKLRILADLLAQHHPEQTLIFTDDNATVYRISQDFLIPAI
CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCEEEEC
THKTPVKERHDILQRFRSGDYPTLVASRVLNEGVDVPEASIAIVLSGTGSTREYVQRLGR
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHH
VLRKGKDPDKLALLYEVIAENTSEENTARRRQPTRSKPKLSVVSKSYELNDVPIPRAAES
HHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
KNKGSQSFDE
CCCCCCCCCC
>Mature Secondary Structure
MVRKPTLTYDRGTLILHPPPKGKDWLDYATWDDRVERFRVPAIAYRSLLTATQITDPRLV
CCCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH
DQAKSYEALELTPSLQMEPYRHQQEALDAWQENRRGVVVLPTAAGKTYLAQLVIQATQRS
HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC
TLIAVPTLDLMHQWYAHLVAAFPDAEIGLLGGGSRDRTPILISTYDSAAIQAENLGNRYG
EEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCHHEEHHHCCCEEE
LLVFDECHHLPSSFNRVIAEYAIAPYRLGLTATPERSDGKHEDLDNLIGPTVYRRTAEEL
EEEEHHHHCCHHHHHHHHHHHHCCCEEECCEECCCCCCCCHHHHHHHHCHHHHHHHHHHH
SGVALAKHKTVQIQVKLSTQERERYDELIQTRNQFLQSARIFLGSLKGWQQFVRESARSK
CCEEEEECEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRRAMLAHRQARAIAFGTEGKLRILADLLAQHHPEQTLIFTDDNATVYRISQDFLIPAI
CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCEEEEC
THKTPVKERHDILQRFRSGDYPTLVASRVLNEGVDVPEASIAIVLSGTGSTREYVQRLGR
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHH
VLRKGKDPDKLALLYEVIAENTSEENTARRRQPTRSKPKLSVVSKSYELNDVPIPRAAES
HHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
KNKGSQSFDE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA