| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158335476
Identifier: 158335476
GI number: 158335476
Start: 2325265
End: 2327976
Strand: Reverse
Name: 158335476
Synonym: AM1_2324
Alternate gene names: NA
Gene position: 2327976-2325265 (Counterclockwise)
Preceding gene: 158335478
Following gene: 158335472
Centisome position: 35.79
GC content: 50.63
Gene sequence:
>2712_bases ATGAATACAACCTCTTATATTCCTGAGAATACTGATCAGGAACAGTCGACTTTTAAGGTCTCTACTCCCTTACGTTCACC CACTAGTCCACTAGAGCAGGCTGAGGGCGTTTATGTGACCTTACATGGTCATTTTTATCAGCCTCCTCGGGAAAATCCTT ACTTGGGCACCATCGAACGGCAATCGAGTGCGGCCCCGTTTCATGATTGGAATGAGCGAATTTATCACGAATGCTATCGC CCCAATGCCTTTGCGCGCATTTTTAATGACCAGGGCGAAGTCATCAATATTGTCAATAATTTCGAATATCTCAGCTTCAA TATCGGCCCAACCTTGATGAGCTGGTTGGAGACCTATGATTCGGAGGTTTACCAGCGTATTATTGAAGCCGATCGCAGGA GCTGTGAGCGACTCCAAGGTCACGGTAATGGGATCGCACAAGTCTACAACCACATCATCATGCCCTTGGCCAATCGCCAG GACAAAGTCACCCAAGTGCGCTGGGGCAAAGCAGATTTTCAATCTCGATTTGGCCGCGACCCCGAAGGCATGTGGCTAGC GGAAGCTGCCGTCGATATGGCCACAATTGAAGTGCTGATTGAGGAAGGGATTCGCTTTATTATTCTGGCCCCATCCCAAG CCCAACGCTGCCGGTTGATACCAGGTATGGCTGGCGATACGGATACTGACACCCACCCTACTTGGGAAGAAGTTGGAGGT GCACAAATTGATCCGACCCGGCCCTATCGCTGTTATCTGCCTGATCGTGAACGCTATATCGATATTTTCTTTTACGATGG CCCCATCTCTCGGGATATTGGTTTTAACGCAGTCCTGAGTAGCTCCCAGAATTTGGCCAATCGATTAGGGCAGGCAGTAC GCTGCGATCGCAAGCCGTCTCAGCTAATTTCGATTGCGACTGATGGCGAGACCTTTGGTCACCACAAACGCGATACGGAA AAAGCGATCGCCTATGCGTTTCACGAGACCTTCCCCCAACTGGGATGGACGGTGACCAACTATGCCCATTACCTCAGCCT GCATCCTCCCACTTGGGAAGTGCAGTTGAAGCCGGTGACTGCTTGGAGCTGTGGTCATGGGGTTGATCGTTGGCAAGACG ACTGTGGATGTGGCGGGGAAGGCAGCCTCTGGCATCAAAAATGGCGACGCCCCTTACGGGACGCTTTAGATTGGCTGCGG GATCAACTCAGCGATATCTACCAAGAAATTGGGGGGCTGCTGTTCCAAGATCCCTGGGAAACTCGAAATCGCTATATCGA GATTATGGGCCAGTTCCCTCGGCAAGTGCAGATCGATTCCTCTGCAGCCGATCCCATTCAAGCCTTTCTCAATGCCCATC AAAATCATGAACTGACAGCAGATGAACGGGTTGATGCCTTGCGCTTATTAGAGATTCAGCGTCATAGCTTGTTGATGTAT ACGAGTTGTGGTTGGTTCTTTGCCGAACTCTCAAGGCCCGAGGGGGTACAAATTCTCCGATATGCAGCCCGTGCAGTTGA CTTAGCTGCGGATGTTGCAGGGATCAGCCTAGAGCCTGAGTTTATCCAGCGCTTGGCTTTGGCCCCTAGTAATGTCGCTC TATTCGAGACGGGAGCGGGTGTGTACCAGCAATTGGTAATTCCCTCTCAAATCGATGTCCAGGCCGTTGCCGCCCACTAT GCCATCACCTCTCTGTTCAATCCCTATCCCCCTCAACATCCTTACTTTTCCTACCAAGCCGAGCAGATAGATTATCAAAT TCAGCGTTTAGGCTCCCTTTCCCTAGCCATTGGCCAGCTGCAACTGACCTCCAATGTCACTTCTGAATCGGAACATCTGG TATTCTGCGTGCTTCACCTGGGCGGTTGGGACTTTCACTGTGGGGTCCAGCTGTTTAGTGGTCGCAAGCATTATTGCGAG ATGAAAGCCAAGCTGTTTAATACCTTGCAACAGGCTAGTGCCACTAATATCGTGTTGGCCATCTCAGAGACCTTTGGTCA TCAGCACTATGGCCTCCATGACCTCTTGCCAGAAGAGCGCCATCGGATTATTTCTCTTCTGTCCCAAGAGACCTTAAGTC GTCTCAACCAGCTCTATACCCAGGTCTATCGAGATAACTATGGGGTTTTAATGGCCTTCCAATACGATGACCTGGAAGTG CCCCCCGAATTGCTGACAGCCGCTCAAGTTGCTCTCAACCATCGTGCCTTAAATACCCTTAAAAGCTTGGAGAAGGAGAT GAGCGATCCAGACCTGGAAACCTCCCAGGTGGGTGCCAGTGATTTGGCAGAACTGGCTGCGATCGCAACTGAAGCTGAGC AAGCTGGATGTCGCCTCAAATTGGATGCCGCCTATCCCTTACTCGAAGATTTAATTCTCCGTCTGCTCTGGCAACTGTTC CATCACGTAGATGTGGACTTATCTCCCCATCGGATTCAGCGTCTACAAACCTTGCTTAATCTGGTCCATCAACTCCAGCT TGATATTCATCTCGATCGGGCTCAAGAACTCTATCTCCGTTGTCTGCAAGAGCAGATGACCCTTTTGAATCACAGTCAAG CCATCACCCAGGCTCAATTGCGAGAGCAAAACAGCAACGATCAGACGCTATCTCAGGAGCAGCCATTATCGATGGTGCAA ATGCGTCAGTTGCTCCAGTTGGGTCGCAAGCTAGCCATTGATGTGCAGCCATGGTTGGACAGCTATCAGTAG
Upstream 100 bases:
>100_bases AAACTGATCTGGATGTTCGAGTTTGAAATCAAGCTTTAAGCGAGCGCTTAATGATTCCGCATCAACGCTAAATCTCTTCA TCCATGGCGGTTTTTTTGAT
Downstream 100 bases:
>100_bases TTCTTACTCTACGGATTGACTCGCCGGCACAATGGATGAGGGGGTGGATTGGTGAAGCTGTAAGGCACTTTGCTGTGTAG TATGTAATTGCCAGATCGCT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase
Number of amino acids: Translated: 903; Mature: 903
Protein sequence:
>903_residues MNTTSYIPENTDQEQSTFKVSTPLRSPTSPLEQAEGVYVTLHGHFYQPPRENPYLGTIERQSSAAPFHDWNERIYHECYR PNAFARIFNDQGEVINIVNNFEYLSFNIGPTLMSWLETYDSEVYQRIIEADRRSCERLQGHGNGIAQVYNHIIMPLANRQ DKVTQVRWGKADFQSRFGRDPEGMWLAEAAVDMATIEVLIEEGIRFIILAPSQAQRCRLIPGMAGDTDTDTHPTWEEVGG AQIDPTRPYRCYLPDRERYIDIFFYDGPISRDIGFNAVLSSSQNLANRLGQAVRCDRKPSQLISIATDGETFGHHKRDTE KAIAYAFHETFPQLGWTVTNYAHYLSLHPPTWEVQLKPVTAWSCGHGVDRWQDDCGCGGEGSLWHQKWRRPLRDALDWLR DQLSDIYQEIGGLLFQDPWETRNRYIEIMGQFPRQVQIDSSAADPIQAFLNAHQNHELTADERVDALRLLEIQRHSLLMY TSCGWFFAELSRPEGVQILRYAARAVDLAADVAGISLEPEFIQRLALAPSNVALFETGAGVYQQLVIPSQIDVQAVAAHY AITSLFNPYPPQHPYFSYQAEQIDYQIQRLGSLSLAIGQLQLTSNVTSESEHLVFCVLHLGGWDFHCGVQLFSGRKHYCE MKAKLFNTLQQASATNIVLAISETFGHQHYGLHDLLPEERHRIISLLSQETLSRLNQLYTQVYRDNYGVLMAFQYDDLEV PPELLTAAQVALNHRALNTLKSLEKEMSDPDLETSQVGASDLAELAAIATEAEQAGCRLKLDAAYPLLEDLILRLLWQLF HHVDVDLSPHRIQRLQTLLNLVHQLQLDIHLDRAQELYLRCLQEQMTLLNHSQAITQAQLREQNSNDQTLSQEQPLSMVQ MRQLLQLGRKLAIDVQPWLDSYQ
Sequences:
>Translated_903_residues MNTTSYIPENTDQEQSTFKVSTPLRSPTSPLEQAEGVYVTLHGHFYQPPRENPYLGTIERQSSAAPFHDWNERIYHECYR PNAFARIFNDQGEVINIVNNFEYLSFNIGPTLMSWLETYDSEVYQRIIEADRRSCERLQGHGNGIAQVYNHIIMPLANRQ DKVTQVRWGKADFQSRFGRDPEGMWLAEAAVDMATIEVLIEEGIRFIILAPSQAQRCRLIPGMAGDTDTDTHPTWEEVGG AQIDPTRPYRCYLPDRERYIDIFFYDGPISRDIGFNAVLSSSQNLANRLGQAVRCDRKPSQLISIATDGETFGHHKRDTE KAIAYAFHETFPQLGWTVTNYAHYLSLHPPTWEVQLKPVTAWSCGHGVDRWQDDCGCGGEGSLWHQKWRRPLRDALDWLR DQLSDIYQEIGGLLFQDPWETRNRYIEIMGQFPRQVQIDSSAADPIQAFLNAHQNHELTADERVDALRLLEIQRHSLLMY TSCGWFFAELSRPEGVQILRYAARAVDLAADVAGISLEPEFIQRLALAPSNVALFETGAGVYQQLVIPSQIDVQAVAAHY AITSLFNPYPPQHPYFSYQAEQIDYQIQRLGSLSLAIGQLQLTSNVTSESEHLVFCVLHLGGWDFHCGVQLFSGRKHYCE MKAKLFNTLQQASATNIVLAISETFGHQHYGLHDLLPEERHRIISLLSQETLSRLNQLYTQVYRDNYGVLMAFQYDDLEV PPELLTAAQVALNHRALNTLKSLEKEMSDPDLETSQVGASDLAELAAIATEAEQAGCRLKLDAAYPLLEDLILRLLWQLF HHVDVDLSPHRIQRLQTLLNLVHQLQLDIHLDRAQELYLRCLQEQMTLLNHSQAITQAQLREQNSNDQTLSQEQPLSMVQ MRQLLQLGRKLAIDVQPWLDSYQ >Mature_903_residues MNTTSYIPENTDQEQSTFKVSTPLRSPTSPLEQAEGVYVTLHGHFYQPPRENPYLGTIERQSSAAPFHDWNERIYHECYR PNAFARIFNDQGEVINIVNNFEYLSFNIGPTLMSWLETYDSEVYQRIIEADRRSCERLQGHGNGIAQVYNHIIMPLANRQ DKVTQVRWGKADFQSRFGRDPEGMWLAEAAVDMATIEVLIEEGIRFIILAPSQAQRCRLIPGMAGDTDTDTHPTWEEVGG AQIDPTRPYRCYLPDRERYIDIFFYDGPISRDIGFNAVLSSSQNLANRLGQAVRCDRKPSQLISIATDGETFGHHKRDTE KAIAYAFHETFPQLGWTVTNYAHYLSLHPPTWEVQLKPVTAWSCGHGVDRWQDDCGCGGEGSLWHQKWRRPLRDALDWLR DQLSDIYQEIGGLLFQDPWETRNRYIEIMGQFPRQVQIDSSAADPIQAFLNAHQNHELTADERVDALRLLEIQRHSLLMY TSCGWFFAELSRPEGVQILRYAARAVDLAADVAGISLEPEFIQRLALAPSNVALFETGAGVYQQLVIPSQIDVQAVAAHY AITSLFNPYPPQHPYFSYQAEQIDYQIQRLGSLSLAIGQLQLTSNVTSESEHLVFCVLHLGGWDFHCGVQLFSGRKHYCE MKAKLFNTLQQASATNIVLAISETFGHQHYGLHDLLPEERHRIISLLSQETLSRLNQLYTQVYRDNYGVLMAFQYDDLEV PPELLTAAQVALNHRALNTLKSLEKEMSDPDLETSQVGASDLAELAAIATEAEQAGCRLKLDAAYPLLEDLILRLLWQLF HHVDVDLSPHRIQRLQTLLNLVHQLQLDIHLDRAQELYLRCLQEQMTLLNHSQAITQAQLREQNSNDQTLSQEQPLSMVQ MRQLLQLGRKLAIDVQPWLDSYQ
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103153; Mature: 103153
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTSYIPENTDQEQSTFKVSTPLRSPTSPLEQAEGVYVTLHGHFYQPPRENPYLGTIER CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCEEEEEC QSSAAPFHDWNERIYHECYRPNAFARIFNDQGEVINIVNNFEYLSFNIGPTLMSWLETYD CCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHH SEVYQRIIEADRRSCERLQGHGNGIAQVYNHIIMPLANRQDKVTQVRWGKADFQSRFGRD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCHHHHHHCCCC PEGMWLAEAAVDMATIEVLIEEGIRFIILAPSQAQRCRLIPGMAGDTDTDTHPTWEEVGG CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHCCC AQIDPTRPYRCYLPDRERYIDIFFYDGPISRDIGFNAVLSSSQNLANRLGQAVRCDRKPS CCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCC QLISIATDGETFGHHKRDTEKAIAYAFHETFPQLGWTVTNYAHYLSLHPPTWEVQLKPVT CEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCEEEEEEEEE AWSCGHGVDRWQDDCGCGGEGSLWHQKWRRPLRDALDWLRDQLSDIYQEIGGLLFQDPWE EECCCCCCHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHH TRNRYIEIMGQFPRQVQIDSSAADPIQAFLNAHQNHELTADERVDALRLLEIQRHSLLMY HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEE TSCGWFFAELSRPEGVQILRYAARAVDLAADVAGISLEPEFIQRLALAPSNVALFETGAG ECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCH VYQQLVIPSQIDVQAVAAHYAITSLFNPYPPQHPYFSYQAEQIDYQIQRLGSLSLAIGQL HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEE QLTSNVTSESEHLVFCVLHLGGWDFHCGVQLFSGRKHYCEMKAKLFNTLQQASATNIVLA EEECCCCCCCCCEEEEEEEECCCCEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE ISETFGHQHYGLHDLLPEERHRIISLLSQETLSRLNQLYTQVYRDNYGVLMAFQYDDLEV EEHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PPELLTAAQVALNHRALNTLKSLEKEMSDPDLETSQVGASDLAELAAIATEAEQAGCRLK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEE LDAAYPLLEDLILRLLWQLFHHVDVDLSPHRIQRLQTLLNLVHQLQLDIHLDRAQELYLR ECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHH CLQEQMTLLNHSQAITQAQLREQNSNDQTLSQEQPLSMVQMRQLLQLGRKLAIDVQPWLD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHEEEEEHHHCC SYQ CCC >Mature Secondary Structure MNTTSYIPENTDQEQSTFKVSTPLRSPTSPLEQAEGVYVTLHGHFYQPPRENPYLGTIER CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCEEEEEC QSSAAPFHDWNERIYHECYRPNAFARIFNDQGEVINIVNNFEYLSFNIGPTLMSWLETYD CCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHH SEVYQRIIEADRRSCERLQGHGNGIAQVYNHIIMPLANRQDKVTQVRWGKADFQSRFGRD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHEECCCHHHHHHCCCC PEGMWLAEAAVDMATIEVLIEEGIRFIILAPSQAQRCRLIPGMAGDTDTDTHPTWEEVGG CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHCCC AQIDPTRPYRCYLPDRERYIDIFFYDGPISRDIGFNAVLSSSQNLANRLGQAVRCDRKPS CCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCC QLISIATDGETFGHHKRDTEKAIAYAFHETFPQLGWTVTNYAHYLSLHPPTWEVQLKPVT CEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCEEEEEEEEE AWSCGHGVDRWQDDCGCGGEGSLWHQKWRRPLRDALDWLRDQLSDIYQEIGGLLFQDPWE EECCCCCCHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHH TRNRYIEIMGQFPRQVQIDSSAADPIQAFLNAHQNHELTADERVDALRLLEIQRHSLLMY HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEE TSCGWFFAELSRPEGVQILRYAARAVDLAADVAGISLEPEFIQRLALAPSNVALFETGAG ECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCH VYQQLVIPSQIDVQAVAAHYAITSLFNPYPPQHPYFSYQAEQIDYQIQRLGSLSLAIGQL HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEE QLTSNVTSESEHLVFCVLHLGGWDFHCGVQLFSGRKHYCEMKAKLFNTLQQASATNIVLA EEECCCCCCCCCEEEEEEEECCCCEECCHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE ISETFGHQHYGLHDLLPEERHRIISLLSQETLSRLNQLYTQVYRDNYGVLMAFQYDDLEV EEHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC PPELLTAAQVALNHRALNTLKSLEKEMSDPDLETSQVGASDLAELAAIATEAEQAGCRLK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEE LDAAYPLLEDLILRLLWQLFHHVDVDLSPHRIQRLQTLLNLVHQLQLDIHLDRAQELYLR ECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHH CLQEQMTLLNHSQAITQAQLREQNSNDQTLSQEQPLSMVQMRQLLQLGRKLAIDVQPWLD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHEEEEEHHHCC SYQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA