Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158335474

Identifier: 158335474

GI number: 158335474

Start: 2323388

End: 2323993

Strand: Direct

Name: 158335474

Synonym: AM1_2322

Alternate gene names: NA

Gene position: 2323388-2323993 (Clockwise)

Preceding gene: 158335473

Following gene: 158335475

Centisome position: 35.72

GC content: 48.84

Gene sequence:

>606_bases
ATGGCACAACTACGGTACCAAAGTAGGCGGTTCTGGGGAGGGCTGGTTGGCGTTGCCTTAGTATTAGGAGGATCTGGCTG
TCAACCCCAACAGACATCCACAGAAACGAGTCCTTCGCCTACAGCTTCTCCTCAACCCGGCCAAACAGATCCTGAACCGC
CCGTTGCGAACCCTGAGCTTGCGGTTTATTGGGTTGCCTATAAAGATCAAGAGCAGCTGGTGCTGGAACCCACCAAACTG
CCCCTAGATAACTTGGAAAATGCCACGTCTGAGGAACAATTAGTCGTTGCTTTCAAACGGCTACTGGAAGGACCTGCTAA
TACTGATAAGACAAATGCAATTCCTGAAAAGACTCAACTGAATAGCCTGAAATTGCAAGAGGATGGGATTCGCATTGATT
TATCGAGGGAGTTCACAACTGGTGGCGGGACCAAATCGATGCAAGCTCGTCTCGGCCAAGTTGTTTACACTGCCAGCAGT
TTGAATCCCAAGGAAGCCATTTGGATTTCCATTGATGGAGAGCCCTTAGAGGTTTTATCCGGGGATGGGCTCATCGTTTC
ACAACCGATGACCCGCAAGGAATTTGATGATAACTTTTCCCTATAA

Upstream 100 bases:

>100_bases
ACCCACAAACCCAGATTAGATTCCTTGAGTTAGGCTAGACTGGATGGCCCCCTGTTCTCCTGATCTAGTTAGATGTATTC
ATAGAGGATGAAGTCCAAAA

Downstream 100 bases:

>100_bases
ACGAAAGGGCCTTTAGAGGATATCCGTGAGTTTCTGGGGCTTCTGGGAATCCTAAAGATAGGCTCTTGGTTTGGGGTCTA
AAGAACTGGATCTGGGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAQLRYQSRRFWGGLVGVALVLGGSGCQPQQTSTETSPSPTASPQPGQTDPEPPVANPELAVYWVAYKDQEQLVLEPTKL
PLDNLENATSEEQLVVAFKRLLEGPANTDKTNAIPEKTQLNSLKLQEDGIRIDLSREFTTGGGTKSMQARLGQVVYTASS
LNPKEAIWISIDGEPLEVLSGDGLIVSQPMTRKEFDDNFSL

Sequences:

>Translated_201_residues
MAQLRYQSRRFWGGLVGVALVLGGSGCQPQQTSTETSPSPTASPQPGQTDPEPPVANPELAVYWVAYKDQEQLVLEPTKL
PLDNLENATSEEQLVVAFKRLLEGPANTDKTNAIPEKTQLNSLKLQEDGIRIDLSREFTTGGGTKSMQARLGQVVYTASS
LNPKEAIWISIDGEPLEVLSGDGLIVSQPMTRKEFDDNFSL
>Mature_200_residues
AQLRYQSRRFWGGLVGVALVLGGSGCQPQQTSTETSPSPTASPQPGQTDPEPPVANPELAVYWVAYKDQEQLVLEPTKLP
LDNLENATSEEQLVVAFKRLLEGPANTDKTNAIPEKTQLNSLKLQEDGIRIDLSREFTTGGGTKSMQARLGQVVYTASSL
NPKEAIWISIDGEPLEVLSGDGLIVSQPMTRKEFDDNFSL

Specific function: Unknown

COG id: COG5401

COG function: function code R; Spore germination protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21901; Mature: 21770

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLRYQSRRFWGGLVGVALVLGGSGCQPQQTSTETSPSPTASPQPGQTDPEPPVANPEL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
AVYWVAYKDQEQLVLEPTKLPLDNLENATSEEQLVVAFKRLLEGPANTDKTNAIPEKTQL
EEEEEEECCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NSLKLQEDGIRIDLSREFTTGGGTKSMQARLGQVVYTASSLNPKEAIWISIDGEPLEVLS
CCEEEECCCEEEEEECEECCCCCCHHHHHHHHHEEEEECCCCCCEEEEEEECCCCEEEEC
GDGLIVSQPMTRKEFDDNFSL
CCCEEEECCCCHHHCCCCCCC
>Mature Secondary Structure 
AQLRYQSRRFWGGLVGVALVLGGSGCQPQQTSTETSPSPTASPQPGQTDPEPPVANPEL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
AVYWVAYKDQEQLVLEPTKLPLDNLENATSEEQLVVAFKRLLEGPANTDKTNAIPEKTQL
EEEEEEECCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NSLKLQEDGIRIDLSREFTTGGGTKSMQARLGQVVYTASSLNPKEAIWISIDGEPLEVLS
CCEEEECCCEEEEEECEECCCCCCHHHHHHHHHEEEEECCCCCCEEEEEEECCCCEEEEC
GDGLIVSQPMTRKEFDDNFSL
CCCEEEECCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA