Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158335255

Identifier: 158335255

GI number: 158335255

Start: 2088255

End: 2088626

Strand: Reverse

Name: 158335255

Synonym: AM1_2097

Alternate gene names: NA

Gene position: 2088626-2088255 (Counterclockwise)

Preceding gene: 158335256

Following gene: 158335252

Centisome position: 32.11

GC content: 50.0

Gene sequence:

>372_bases
ATGCCTACAGCATATGATAGCGACCTCACCACCCTGCAATGGGAATTACTTGAGCCCTTGATTCCTGCTGCTAAACCTGG
AGGTAGACCTCGCACCACTGATATGCGCAGTGTTCTCAATGCCATTTTTTATCTCGTGGTTACGGGTTGCCAGTGGAGAC
AGCTACCTCATGACTTTCCCTGTTGGTCAACGGTCTATAGCTATTTTCGAAGGTGGCGTGATGATGGGACTTGGGTCCAC
ATCAATGAGCATCTACGCATGCAAGAGCGGGTGAGTGAAGACCGTCATCCAAGTCCCAGTGCCGCCATCTGCGATGCTCA
ATCGGTTAAAGTCGGCAATCCTCGGTGTCATACCAATTCACTTATTGAGTGA

Upstream 100 bases:

>100_bases
CTGTTGAACGCAGTTCGTTAGAGGCTGTTTGAGAAGTGAGTAAAGCTCTCAAGGTACTAAATCTGTCAATACACAAACAC
TGGACAGGACCTAGAGAGCA

Downstream 100 bases:

>100_bases
CCTTTATAGTCAAAGCATCCAAGATATAAGAATATCCCGTTAGAGAAGCCACCACCTTCTGGGAGAGGGTATTGATATGC
TCAAATAAAGCGGTCTCCAG

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; Transposase And Inactivated Derivatives-Like Protein; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Transposase Of; ISPs1 Transposase OrfA; Transposase And Inactivated Derivatives-Like; Transposase Protein; Family Transposase; Transposase Is4 Family Protein; Transposon; Transposase Related Protein; Pseudo Transposase; Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Fragment

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MPTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAIFYLVVTGCQWRQLPHDFPCWSTVYSYFRRWRDDGTWVH
INEHLRMQERVSEDRHPSPSAAICDAQSVKVGNPRCHTNSLIE

Sequences:

>Translated_123_residues
MPTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAIFYLVVTGCQWRQLPHDFPCWSTVYSYFRRWRDDGTWVH
INEHLRMQERVSEDRHPSPSAAICDAQSVKVGNPRCHTNSLIE
>Mature_122_residues
PTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAIFYLVVTGCQWRQLPHDFPCWSTVYSYFRRWRDDGTWVHI
NEHLRMQERVSEDRHPSPSAAICDAQSVKVGNPRCHTNSLIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14240; Mature: 14109

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAIFYLVVTGCQWRQLPHDFP
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCC
CWSTVYSYFRRWRDDGTWVHINEHLRMQERVSEDRHPSPSAAICDAQSVKVGNPRCHTNS
CHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
LIE
CCC
>Mature Secondary Structure 
PTAYDSDLTTLQWELLEPLIPAAKPGGRPRTTDMRSVLNAIFYLVVTGCQWRQLPHDFP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCC
CWSTVYSYFRRWRDDGTWVHINEHLRMQERVSEDRHPSPSAAICDAQSVKVGNPRCHTNS
CHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCC
LIE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA