| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is hemH [H]
Identifier: 158335118
GI number: 158335118
Start: 1953609
End: 1954772
Strand: Direct
Name: hemH [H]
Synonym: AM1_1959
Alternate gene names: 158335118
Gene position: 1953609-1954772 (Clockwise)
Preceding gene: 158335117
Following gene: 158335121
Centisome position: 30.04
GC content: 48.71
Gene sequence:
>1164_bases ATGGGCCGTGTCGGTGTTCTATTACTGAATCTAGGGGGACCAGAACAGCTAAAGGATGTACGTCCTTTTTTGTATAACCT GTTTGCTGACCCAGAAATTTTACGACTGCCATTTGCCTGGATGCAAAAGCCTTTTGCCGGGTTAATTTCAACCATGCGAG CCCGAACGTCTCGGGACAACTATCGGCAAATCGGAGGCGGATCCCCTCTACGACGGATCACCGAAGCCCAAGCCCACGCG CTCCAAGACGACTTACAGGCTAAGGGATGTGACGCCCAGGTCTATATCGGTATGCGTTACTGGCACCCTTTTACAGAAGA GGCCGTCAACCGCATTAAACAGGATGGCATTGAAGAGCTGGTTATCCTGCCCTTGTATCCTCAGTTTTCTATTAGTACGA GTGGTTCAAGTATCCGGTTATTGGAAAAGATTTGGTCTGAAGATCCAGCATTACAAAAAATCAAGTACACCGTTATCTCC TCTTGGCACGATCGCCCTGGCTATGTTCAAGTTATGGCCGACTTTTTGCGTCAAGAGCTGGATCAATTTGAGAATCCAGA CCAAACGACCGTATTTTTTAGCGCCCATGGCGTCCCTCTCAGCTATGTGACTGAATCAGGAGACCCCTATCAGCAGGAGA TTGAAGCCAGTACCCAGCTGATCATGGAAGCGTTAAAACGCCCTAATCCCCATATCTTGGCCTATCAAAGCCGAGTGGGA CCGATGGAGTGGTTACGCCCCTACACCACGAATGTGATTGCCCATTTAGGTCAGCAAGGGGTTAAAGATTTAGTGGTGGT TCCCATTAGCTTTATCTCGGAACATATCGAGACGCTCCAAGAAATCGATATGGAATACCGGCATTTAGCGCTAGAGTCAG GCATTGAAAATTTTCGCCGGATGCCAGCTGTCAATACCCATCCAGACTTTATTGATACCCTCAGTGAGATGGTGCTGGAA TATCTGGACAAGCCTTCCCTTAGGTTCTCTCAAGTTTTTCGCCCCCAGAAAAAGATCAAGCTGTATCCTCAAGAGCGTTG GGAATGGGGGATGACCACCACAGCAGAGCGCTGGAATGGTCGCTTTGCGATGGTCGGCTTTATTGCATTACTGGTTGAAC TGATCAGCGGTTATGGTCCCCTGCATTTAGCGGGGCTACTTTAA
Upstream 100 bases:
>100_bases CTGCATAGCTCTATCAGAAATATTGGTCATTTGTCAATGCTTTACCCAGACAATGTTGTTAAAATAAGTAACAGAGTTTA ACAAAGGCAATCATCAGGTT
Downstream 100 bases:
>100_bases GCTATAGCTTTTTAGAAAGTTCAGCCTTCCAGAGTTTGTGCCAGTGGCTGCGGACAGCCCGGTTGGCATCGTACATCGTC GAATACCGTGCTTGGATATT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MGRVGVLLLNLGGPEQLKDVRPFLYNLFADPEILRLPFAWMQKPFAGLISTMRARTSRDNYRQIGGGSPLRRITEAQAHA LQDDLQAKGCDAQVYIGMRYWHPFTEEAVNRIKQDGIEELVILPLYPQFSISTSGSSIRLLEKIWSEDPALQKIKYTVIS SWHDRPGYVQVMADFLRQELDQFENPDQTTVFFSAHGVPLSYVTESGDPYQQEIEASTQLIMEALKRPNPHILAYQSRVG PMEWLRPYTTNVIAHLGQQGVKDLVVVPISFISEHIETLQEIDMEYRHLALESGIENFRRMPAVNTHPDFIDTLSEMVLE YLDKPSLRFSQVFRPQKKIKLYPQERWEWGMTTTAERWNGRFAMVGFIALLVELISGYGPLHLAGLL
Sequences:
>Translated_387_residues MGRVGVLLLNLGGPEQLKDVRPFLYNLFADPEILRLPFAWMQKPFAGLISTMRARTSRDNYRQIGGGSPLRRITEAQAHA LQDDLQAKGCDAQVYIGMRYWHPFTEEAVNRIKQDGIEELVILPLYPQFSISTSGSSIRLLEKIWSEDPALQKIKYTVIS SWHDRPGYVQVMADFLRQELDQFENPDQTTVFFSAHGVPLSYVTESGDPYQQEIEASTQLIMEALKRPNPHILAYQSRVG PMEWLRPYTTNVIAHLGQQGVKDLVVVPISFISEHIETLQEIDMEYRHLALESGIENFRRMPAVNTHPDFIDTLSEMVLE YLDKPSLRFSQVFRPQKKIKLYPQERWEWGMTTTAERWNGRFAMVGFIALLVELISGYGPLHLAGLL >Mature_386_residues GRVGVLLLNLGGPEQLKDVRPFLYNLFADPEILRLPFAWMQKPFAGLISTMRARTSRDNYRQIGGGSPLRRITEAQAHAL QDDLQAKGCDAQVYIGMRYWHPFTEEAVNRIKQDGIEELVILPLYPQFSISTSGSSIRLLEKIWSEDPALQKIKYTVISS WHDRPGYVQVMADFLRQELDQFENPDQTTVFFSAHGVPLSYVTESGDPYQQEIEASTQLIMEALKRPNPHILAYQSRVGP MEWLRPYTTNVIAHLGQQGVKDLVVVPISFISEHIETLQEIDMEYRHLALESGIENFRRMPAVNTHPDFIDTLSEMVLEY LDKPSLRFSQVFRPQKKIKLYPQERWEWGMTTTAERWNGRFAMVGFIALLVELISGYGPLHLAGLL
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=336, Percent_Identity=39.5833333333333, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI60499025, Length=336, Percent_Identity=39.5833333333333, Blast_Score=234, Evalue=7e-62, Organism=Escherichia coli, GI1786681, Length=324, Percent_Identity=29.9382716049383, Blast_Score=134, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6324750, Length=344, Percent_Identity=34.3023255813954, Blast_Score=196, Evalue=4e-51, Organism=Drosophila melanogaster, GI17864156, Length=326, Percent_Identity=35.8895705521472, Blast_Score=218, Evalue=4e-57, Organism=Drosophila melanogaster, GI24651774, Length=256, Percent_Identity=32.8125, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI45552018, Length=172, Percent_Identity=41.8604651162791, Blast_Score=142, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 44381; Mature: 44249
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVGVLLLNLGGPEQLKDVRPFLYNLFADPEILRLPFAWMQKPFAGLISTMRARTSRDN CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHEECCHHHHHCHHHHHHHHHHHHHCCCH YRQIGGGSPLRRITEAQAHALQDDLQAKGCDAQVYIGMRYWHPFTEEAVNRIKQDGIEEL HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCHHHHHHHHHHHCCHHHE VILPLYPQFSISTSGSSIRLLEKIWSEDPALQKIKYTVISSWHDRPGYVQVMADFLRQEL EEEECCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DQFENPDQTTVFFSAHGVPLSYVTESGDPYQQEIEASTQLIMEALKRPNPHILAYQSRVG HHCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PMEWLRPYTTNVIAHLGQQGVKDLVVVPISFISEHIETLQEIDMEYRHLALESGIENFRR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPAVNTHPDFIDTLSEMVLEYLDKPSLRFSQVFRPQKKIKLYPQERWEWGMTTTAERWNG CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHEECCCHHHCCCCCCCCHHHHCC RFAMVGFIALLVELISGYGPLHLAGLL CHHHHHHHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure GRVGVLLLNLGGPEQLKDVRPFLYNLFADPEILRLPFAWMQKPFAGLISTMRARTSRDN CCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHEECCHHHHHCHHHHHHHHHHHHHCCCH YRQIGGGSPLRRITEAQAHALQDDLQAKGCDAQVYIGMRYWHPFTEEAVNRIKQDGIEEL HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCHHHHHHHHHHHCCHHHE VILPLYPQFSISTSGSSIRLLEKIWSEDPALQKIKYTVISSWHDRPGYVQVMADFLRQEL EEEECCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH DQFENPDQTTVFFSAHGVPLSYVTESGDPYQQEIEASTQLIMEALKRPNPHILAYQSRVG HHCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC PMEWLRPYTTNVIAHLGQQGVKDLVVVPISFISEHIETLQEIDMEYRHLALESGIENFRR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPAVNTHPDFIDTLSEMVLEYLDKPSLRFSQVFRPQKKIKLYPQERWEWGMTTTAERWNG CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHEECCCHHHCCCCCCCCHHHHCC RFAMVGFIALLVELISGYGPLHLAGLL CHHHHHHHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA