| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158335047
Identifier: 158335047
GI number: 158335047
Start: 1878213
End: 1878479
Strand: Direct
Name: 158335047
Synonym: AM1_1885
Alternate gene names: NA
Gene position: 1878213-1878479 (Clockwise)
Preceding gene: 158335045
Following gene: 158335048
Centisome position: 28.88
GC content: 51.31
Gene sequence:
>267_bases ATGTACACCATTGACATTTCCCTTCGCGGCACGCCTTTAGGACTCTCCGTTCAACGCAAAGAATCCGCAGATGCTGAAGC ACTGTATCAACAGGTCTTAGCCGCCATCAAATCAGGGAATCCGACCATTTTAGAAATGACGTGCGATCGCGAACCTGATA AAAAAGCCGCCGTTCTCGTCAACGAAATTACCGCTGTTCAACTATCGGATAAGTCTGGAGGAGCTGGTGCAGGCCGCGCT GCGGGCTTCTTTGAGCTAGGGGCATGA
Upstream 100 bases:
>100_bases CAATACTGGAACAGGACAATCGCAGGTCTTATACCTATAATTAGGACTTCAGACCTGTTTATTCCTGTGAATGCACCTCA TACGGCACCTTTAACCATAT
Downstream 100 bases:
>100_bases CCACCCCTGCCATCCAACTGCAGAATTTATCCTTTGGATGGTCTAAAGATCAGCCCGTATTGAAAAACTGTTCACTGCAG GTGCCCAAAGGCCAGTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MYTIDISLRGTPLGLSVQRKESADAEALYQQVLAAIKSGNPTILEMTCDREPDKKAAVLVNEITAVQLSDKSGGAGAGRA AGFFELGA
Sequences:
>Translated_88_residues MYTIDISLRGTPLGLSVQRKESADAEALYQQVLAAIKSGNPTILEMTCDREPDKKAAVLVNEITAVQLSDKSGGAGAGRA AGFFELGA >Mature_88_residues MYTIDISLRGTPLGLSVQRKESADAEALYQQVLAAIKSGNPTILEMTCDREPDKKAAVLVNEITAVQLSDKSGGAGAGRA AGFFELGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0367 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1885_ACAM1 (B0CED9)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001516219.1 - GeneID: 5680701 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_1885 - HOGENOM: HBG284625 - OMA: VQIYEKS - ProtClustDB: PRK13683 - BioCyc: AMAR329726:AM1_1885-MONOMER - HAMAP: MF_01360 - InterPro: IPR020885
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9198; Mature: 9198
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTIDISLRGTPLGLSVQRKESADAEALYQQVLAAIKSGNPTILEMTCDREPDKKAAVLV CEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE NEITAVQLSDKSGGAGAGRAAGFFELGA EEEEEEEEECCCCCCCCCCCCCEEEECC >Mature Secondary Structure MYTIDISLRGTPLGLSVQRKESADAEALYQQVLAAIKSGNPTILEMTCDREPDKKAAVLV CEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE NEITAVQLSDKSGGAGAGRAAGFFELGA EEEEEEEEECCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA