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The map label for this gene is ypfJ [H]

Identifier: 158334997

GI number: 158334997

Start: 1824138

End: 1824992

Strand: Direct

Name: ypfJ [H]

Synonym: AM1_1835

Alternate gene names: 158334997

Gene position: 1824138-1824992 (Clockwise)

Preceding gene: 158334996

Following gene: 158334999

Centisome position: 28.05

GC content: 51.81

Gene sequence:

>855_bases
ATGCGCTGGAAAATGGGCCGAAGAAGCACTAATGTTGAGGATCGGCGGGGTGGTTCTTCAATGCCAACGGCGGCAGGAGG
CGGACTAGGTATCCTGGTGATCACCCTAGTTGCGGCCTTTTTTGGTATCGACCCGAGCTTAATTTTAGATCAGGCCAACC
AGTTTGATAATCCCCCGACCACCTCAGCGCCAGATAGGCGACCTGCGGCTGAAAATGAGCTAGCCGACTTCGTCTCTGTC
GTACTTGCTGATACGGAAGACACTTGGGAGACCTTGTTTCGCCAAGGTGGGCAAACTTACCGAAAACCCAAGCTGGTGTT
ATTTTCCGGTCAGACATCGTCTGCCTGCGGACTAGGGAAAGCGGCGATGGGGCCTTTCTATTGCCCTGCGGATCAGAAAG
TCTATATCGATCTGAGCTTTTATAAAGACCTCAAAGAAAGGCACCAGGCTCCAGGTGATTTCGCCCAAGCTTATGTGATT
GCTCACGAGGTGGGACACCATGTCCAAACTCTACTGGGCGTTTCTCGTAAAGTCTATGAGTTAAGAAGCCGGGTTAGCAA
AGTAGAAGGCAATCAGCTTTCCGTGCGCCAAGAACTCCAAGCAGATTGCTTTGCTGGGATTTGGGCACATCATGCCAATC
GAACCCGCCAAATTTTGGAACAAGGCGATATAGAAGAAGCTTTGAATGCAGCGAGTAGTATTGGCGATGATCGCTTACAG
CAGCAAGCGGGCGGCCGTGTAACCCCCGAGTCTTTTACCCATGGGAGTTCTGCCCAGCGCGTGAAATGGTTCAAGGTGGG
CTTGCAAACTGGGAGTCTCAAAGATTGTGACACCTTCGCGACGCGCAACCTCTAA

Upstream 100 bases:

>100_bases
CATGAATGGAAATTTGGCTTAATTATTTTAGTCTTTGGCAAAAAATTACCTAGGATTATTGCACGCAGGGAGCGACATTT
AAATCCGGAGGAAATTTGTC

Downstream 100 bases:

>100_bases
AGAAAACCTGATGGACGCCTGAACTTTAAGCCGCATGTCCCCACCGAGGCGTTAAATTATGCACTTTAGGCGGGGAAGCT
TTGCTAGAAGTCACTTCATA

Product: neutral zinc metallopeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRWKMGRRSTNVEDRRGGSSMPTAAGGGLGILVITLVAAFFGIDPSLILDQANQFDNPPTTSAPDRRPAAENELADFVSV
VLADTEDTWETLFRQGGQTYRKPKLVLFSGQTSSACGLGKAAMGPFYCPADQKVYIDLSFYKDLKERHQAPGDFAQAYVI
AHEVGHHVQTLLGVSRKVYELRSRVSKVEGNQLSVRQELQADCFAGIWAHHANRTRQILEQGDIEEALNAASSIGDDRLQ
QQAGGRVTPESFTHGSSAQRVKWFKVGLQTGSLKDCDTFATRNL

Sequences:

>Translated_284_residues
MRWKMGRRSTNVEDRRGGSSMPTAAGGGLGILVITLVAAFFGIDPSLILDQANQFDNPPTTSAPDRRPAAENELADFVSV
VLADTEDTWETLFRQGGQTYRKPKLVLFSGQTSSACGLGKAAMGPFYCPADQKVYIDLSFYKDLKERHQAPGDFAQAYVI
AHEVGHHVQTLLGVSRKVYELRSRVSKVEGNQLSVRQELQADCFAGIWAHHANRTRQILEQGDIEEALNAASSIGDDRLQ
QQAGGRVTPESFTHGSSAQRVKWFKVGLQTGSLKDCDTFATRNL
>Mature_284_residues
MRWKMGRRSTNVEDRRGGSSMPTAAGGGLGILVITLVAAFFGIDPSLILDQANQFDNPPTTSAPDRRPAAENELADFVSV
VLADTEDTWETLFRQGGQTYRKPKLVLFSGQTSSACGLGKAAMGPFYCPADQKVYIDLSFYKDLKERHQAPGDFAQAYVI
AHEVGHHVQTLLGVSRKVYELRSRVSKVEGNQLSVRQELQADCFAGIWAHHANRTRQILEQGDIEEALNAASSIGDDRLQ
QQAGGRVTPESFTHGSSAQRVKWFKVGLQTGSLKDCDTFATRNL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=291, Percent_Identity=51.8900343642612, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31174; Mature: 31174

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWKMGRRSTNVEDRRGGSSMPTAAGGGLGILVITLVAAFFGIDPSLILDQANQFDNPPT
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
TSAPDRRPAAENELADFVSVVLADTEDTWETLFRQGGQTYRKPKLVLFSGQTSSACGLGK
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCH
AAMGPFYCPADQKVYIDLSFYKDLKERHQAPGDFAQAYVIAHEVGHHVQTLLGVSRKVYE
HHCCCEECCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSRVSKVEGNQLSVRQELQADCFAGIWAHHANRTRQILEQGDIEEALNAASSIGDDRLQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
QQAGGRVTPESFTHGSSAQRVKWFKVGLQTGSLKDCDTFATRNL
HHHCCCCCCHHCCCCCCCHHEEEHEEECCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MRWKMGRRSTNVEDRRGGSSMPTAAGGGLGILVITLVAAFFGIDPSLILDQANQFDNPPT
CCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
TSAPDRRPAAENELADFVSVVLADTEDTWETLFRQGGQTYRKPKLVLFSGQTSSACGLGK
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCH
AAMGPFYCPADQKVYIDLSFYKDLKERHQAPGDFAQAYVIAHEVGHHVQTLLGVSRKVYE
HHCCCEECCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSRVSKVEGNQLSVRQELQADCFAGIWAHHANRTRQILEQGDIEEALNAASSIGDDRLQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
QQAGGRVTPESFTHGSSAQRVKWFKVGLQTGSLKDCDTFATRNL
HHHCCCCCCHHCCCCCCCHHEEEHEEECCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]