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The map label for this gene is yjcF [C]

Identifier: 158334996

GI number: 158334996

Start: 1822483

End: 1823988

Strand: Direct

Name: yjcF [C]

Synonym: AM1_1834

Alternate gene names: 158334996

Gene position: 1822483-1823988 (Clockwise)

Preceding gene: 158334995

Following gene: 158334997

Centisome position: 28.02

GC content: 46.35

Gene sequence:

>1506_bases
GTGGCAAACACGGCCCACCTCCGACTCATAAAACGCGGAGTTAAACATTGGAATAACTGGCGCAAAGACAAGTTTTCCGA
TCAACCCGATTTATCTGAAGCTGATCTCAGTGGGTTAGACCTACGAGGAGCCAATCTGATTGGCGCAGACTTGAACCATG
CGAATTTAACGGGTGCAGATCTAAGTGGGGCCTATTTAAGTGTTGCCAATTTATCCCATGCTTATCTCAGTGAAGCCAAA
CTGACAGGTGCAAATCTTGGCAAAGCCAATCTAGAAGCGGTGGATCTCAGCTTTGCCAACCTCGAACAATCTATTCTTAT
AGAAACTCGGCTAGCAAGAGCATTGCTTGTCGAAGCCAACTTAACCCAGGCTGTTCTCAATTTTGCAGATTTAAGCCGCA
CCAACTTAAGTAAGGCAAATCTCCGTAAAGCACATCTGATCAAAGCAATTCTGCTAGAAGCAAACTTAAGTGATGTCAAC
CTAAAAGGCGCGAATCTCAATCGAGCCCTATTAAGTGAGGCAGATTTAACCCGGGCCAATTTAAGCAACATTAACCTCAG
CAAAGCAGACCTCAGTTTTGCCCGGTTAATTGAAGCCGATCTACATGGTGCCAATCTGAACGGTATTATCCTGATTGAGG
CCAACTTGCGAGGTGCCAATCTACAGGGCAGCACCCTGAAAAAAGGCCAACTCTGTCGGGCTAATTTAGGCGCCGTCGAT
TTAAGCAATGCGGATATCAAAAGCACCAATCTCAGTGATAGTGATTTAATTAACGCCAATCTCAGTAAAGCGCTACTTGT
TGACACCAACCTGAGTGATGCCCAACTGGCAGGGGCTAATTGCCACAAAGCCAGCTTTCTCCATGCCAATCTCAATAAAG
CGAATTTATGTGAGACCAACTTAACGGCAGCGGATTTGAGAGAGGCAGATTTACGCAAGGCCGATCTGACCCGGAGCCAA
ATTCAGGCGGCCAACCTATCCATGACCAACTTGACAGCAGCCTGCCTGGAAGAAGTGGGCTTAAACCGCAGTACCAAGTT
TGACCATACGATTTGTGAGCATGTCTACTTAAAAAGGCATGAGCAAGACCGTCAGCCCAGCCACGGTAAATTTCTGGCTG
GCGAACTCGCACAACTACTATGGACCAGCTCTGAAACCATTAACCTTAACTTTCATAACGGGGTCAATTGGGCGGCCTTT
GCCAATTCTTTGAAACGAATCCAACGGACCTATCCCCAAGCCCAAATGGGTATTCAATGTATTGAACATAAAGGCAATGG
AGTCATTCTGGTGAAGGTTCATACGGCTCCGAATGTGGACCAAGAAAAGGTGCATAAGGAATTGATGCTGGCCTACGTCA
ACACCCGCCGCCAAATGAATCAAGATCAAAAAGATCAGGGGATGGGTAAGGTCACCACCCAAGAATCTTTGCAATTACAA
AATCCCCAAGACATCATCAATAACTTGTTTGACTTACTCAATCCAGCCGTCAGTACTCTGCCCTAA

Upstream 100 bases:

>100_bases
AGTGTAAATCATTATTTGGCACTGACCGGCCTGGCTATTGCATATCTAAAGGCGGGGGGGAAACGCTCGAGTGCAGTAAA
TAAAAAGGACGATTATCCCT

Downstream 100 bases:

>100_bases
ATATCCGCTCTAGTCACGAAGGAATGGGGCAAGTCTGGGGATTGATCCCCATGAATGGAAATTTGGCTTAATTATTTTAG
TCTTTGGCAAAAAATTACCT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MANTAHLRLIKRGVKHWNNWRKDKFSDQPDLSEADLSGLDLRGANLIGADLNHANLTGADLSGAYLSVANLSHAYLSEAK
LTGANLGKANLEAVDLSFANLEQSILIETRLARALLVEANLTQAVLNFADLSRTNLSKANLRKAHLIKAILLEANLSDVN
LKGANLNRALLSEADLTRANLSNINLSKADLSFARLIEADLHGANLNGIILIEANLRGANLQGSTLKKGQLCRANLGAVD
LSNADIKSTNLSDSDLINANLSKALLVDTNLSDAQLAGANCHKASFLHANLNKANLCETNLTAADLREADLRKADLTRSQ
IQAANLSMTNLTAACLEEVGLNRSTKFDHTICEHVYLKRHEQDRQPSHGKFLAGELAQLLWTSSETINLNFHNGVNWAAF
ANSLKRIQRTYPQAQMGIQCIEHKGNGVILVKVHTAPNVDQEKVHKELMLAYVNTRRQMNQDQKDQGMGKVTTQESLQLQ
NPQDIINNLFDLLNPAVSTLP

Sequences:

>Translated_501_residues
MANTAHLRLIKRGVKHWNNWRKDKFSDQPDLSEADLSGLDLRGANLIGADLNHANLTGADLSGAYLSVANLSHAYLSEAK
LTGANLGKANLEAVDLSFANLEQSILIETRLARALLVEANLTQAVLNFADLSRTNLSKANLRKAHLIKAILLEANLSDVN
LKGANLNRALLSEADLTRANLSNINLSKADLSFARLIEADLHGANLNGIILIEANLRGANLQGSTLKKGQLCRANLGAVD
LSNADIKSTNLSDSDLINANLSKALLVDTNLSDAQLAGANCHKASFLHANLNKANLCETNLTAADLREADLRKADLTRSQ
IQAANLSMTNLTAACLEEVGLNRSTKFDHTICEHVYLKRHEQDRQPSHGKFLAGELAQLLWTSSETINLNFHNGVNWAAF
ANSLKRIQRTYPQAQMGIQCIEHKGNGVILVKVHTAPNVDQEKVHKELMLAYVNTRRQMNQDQKDQGMGKVTTQESLQLQ
NPQDIINNLFDLLNPAVSTLP
>Mature_500_residues
ANTAHLRLIKRGVKHWNNWRKDKFSDQPDLSEADLSGLDLRGANLIGADLNHANLTGADLSGAYLSVANLSHAYLSEAKL
TGANLGKANLEAVDLSFANLEQSILIETRLARALLVEANLTQAVLNFADLSRTNLSKANLRKAHLIKAILLEANLSDVNL
KGANLNRALLSEADLTRANLSNINLSKADLSFARLIEADLHGANLNGIILIEANLRGANLQGSTLKKGQLCRANLGAVDL
SNADIKSTNLSDSDLINANLSKALLVDTNLSDAQLAGANCHKASFLHANLNKANLCETNLTAADLREADLRKADLTRSQI
QAANLSMTNLTAACLEEVGLNRSTKFDHTICEHVYLKRHEQDRQPSHGKFLAGELAQLLWTSSETINLNFHNGVNWAAFA
NSLKRIQRTYPQAQMGIQCIEHKGNGVILVKVHTAPNVDQEKVHKELMLAYVNTRRQMNQDQKDQGMGKVTTQESLQLQN
PQDIINNLFDLLNPAVSTLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=185, Percent_Identity=34.0540540540541, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221377802, Length=187, Percent_Identity=34.7593582887701, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 54699; Mature: 54568

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTAHLRLIKRGVKHWNNWRKDKFSDQPDLSEADLSGLDLRGANLIGADLNHANLTGAD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCC
LSGAYLSVANLSHAYLSEAKLTGANLGKANLEAVDLSFANLEQSILIETRLARALLVEAN
CCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHCHHHHHHHHHHHHHHHHHHH
LTQAVLNFADLSRTNLSKANLRKAHLIKAILLEANLSDVNLKGANLNRALLSEADLTRAN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHC
LSNINLSKADLSFARLIEADLHGANLNGIILIEANLRGANLQGSTLKKGQLCRANLGAVD
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
LSNADIKSTNLSDSDLINANLSKALLVDTNLSDAQLAGANCHKASFLHANLNKANLCETN
CCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
LTAADLREADLRKADLTRSQIQAANLSMTNLTAACLEEVGLNRSTKFDHTICEHVYLKRH
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EQDRQPSHGKFLAGELAQLLWTSSETINLNFHNGVNWAAFANSLKRIQRTYPQAQMGIQC
HHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCHHH
IEHKGNGVILVKVHTAPNVDQEKVHKELMLAYVNTRRQMNQDQKDQGMGKVTTQESLQLQ
EEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEECHHHHCCC
NPQDIINNLFDLLNPAVSTLP
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANTAHLRLIKRGVKHWNNWRKDKFSDQPDLSEADLSGLDLRGANLIGADLNHANLTGAD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCCCCC
LSGAYLSVANLSHAYLSEAKLTGANLGKANLEAVDLSFANLEQSILIETRLARALLVEAN
CCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHCHHHHHHHHHHHHHHHHHHH
LTQAVLNFADLSRTNLSKANLRKAHLIKAILLEANLSDVNLKGANLNRALLSEADLTRAN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHC
LSNINLSKADLSFARLIEADLHGANLNGIILIEANLRGANLQGSTLKKGQLCRANLGAVD
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
LSNADIKSTNLSDSDLINANLSKALLVDTNLSDAQLAGANCHKASFLHANLNKANLCETN
CCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
LTAADLREADLRKADLTRSQIQAANLSMTNLTAACLEEVGLNRSTKFDHTICEHVYLKRH
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
EQDRQPSHGKFLAGELAQLLWTSSETINLNFHNGVNWAAFANSLKRIQRTYPQAQMGIQC
HHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCHHH
IEHKGNGVILVKVHTAPNVDQEKVHKELMLAYVNTRRQMNQDQKDQGMGKVTTQESLQLQ
EEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEECHHHHCCC
NPQDIINNLFDLLNPAVSTLP
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]