Click here to switch to the map view.

The map label for this gene is 158334874

Identifier: 158334874

GI number: 158334874

Start: 1694565

End: 1695116

Strand: Direct

Name: 158334874

Synonym: AM1_1711

Alternate gene names: NA

Gene position: 1694565-1695116 (Clockwise)

Preceding gene: 158334873

Following gene: 158334880

Centisome position: 26.06

GC content: 47.83

Gene sequence:

>552_bases
ATGCAACGATCTCATGCCAATTCGGTCATTCTCTTTTTGCTAATCAGCAGTTTATGGCTCATCCCTGGGTTAGGACAGAG
TCAGGCCACACAGATCTCGCTAGAGCAAGCCAAGCAGGAACTCAAAGCAGGGCAATATAATCAAGCTGAAATTCATCTAC
GTCAGATTGTGCAAGATCAACCTCAGTCGGCCGAAGCCTACTTCAATTTAGGGCTAAGCCTACATCTACAGCTCGAATTA
GACGAAGCGATAAAAACCTATGAACAGGCGATCCAACTTGACCCCACTTACGACCGCCCTTATACCAATATGGGGTTAGC
GTTGATTGAAGCCAATCAACTGGATGAAGCCAGTACTGTATTCAAACAGGTCTTATCTTTACCAGAACGCCCCGAGCAAC
CCGCTAGCATCCACACCTTGGCCCACTACAATTTAGCCATTATCCTCAAACGGCAAGGCAAGCTAGATGCTGCGCAGCAG
GAGGTCCAGGCAGCTCTAGCCATCACACCTGGTTTTACGCAAGCTCAAACACTCCAACAAATGCTGAACTGA

Upstream 100 bases:

>100_bases
TTCTCATCAGAGTTGGTCTGAGCTGAGAGATGTGGAGAGTGATGAATGGCTAATCTAGCATCGAGCATTCCCCTGCCATA
CACTAGTCTCAGGTGAATTC

Downstream 100 bases:

>100_bases
AACGCTCGCTTTTATTGCCCCTTGGACAAGATATAGCCCACAGTGCGATTTTCAGACGTAAAGGTCGCTTTTGCAATGCG
CTGAACATCTTCTGGAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Repeat Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Flp Pilus Assembly Protein TadD; Peptidase; Glycosyl Transferase Family Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MQRSHANSVILFLLISSLWLIPGLGQSQATQISLEQAKQELKAGQYNQAEIHLRQIVQDQPQSAEAYFNLGLSLHLQLEL
DEAIKTYEQAIQLDPTYDRPYTNMGLALIEANQLDEASTVFKQVLSLPERPEQPASIHTLAHYNLAIILKRQGKLDAAQQ
EVQAALAITPGFTQAQTLQQMLN

Sequences:

>Translated_183_residues
MQRSHANSVILFLLISSLWLIPGLGQSQATQISLEQAKQELKAGQYNQAEIHLRQIVQDQPQSAEAYFNLGLSLHLQLEL
DEAIKTYEQAIQLDPTYDRPYTNMGLALIEANQLDEASTVFKQVLSLPERPEQPASIHTLAHYNLAIILKRQGKLDAAQQ
EVQAALAITPGFTQAQTLQQMLN
>Mature_183_residues
MQRSHANSVILFLLISSLWLIPGLGQSQATQISLEQAKQELKAGQYNQAEIHLRQIVQDQPQSAEAYFNLGLSLHLQLEL
DEAIKTYEQAIQLDPTYDRPYTNMGLALIEANQLDEASTVFKQVLSLPERPEQPASIHTLAHYNLAIILKRQGKLDAAQQ
EVQAALAITPGFTQAQTLQQMLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=136, Percent_Identity=33.0882352941176, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI32307150, Length=136, Percent_Identity=33.0882352941176, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=136, Percent_Identity=33.0882352941176, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115532692, Length=136, Percent_Identity=33.0882352941176, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20444; Mature: 20444

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSHANSVILFLLISSLWLIPGLGQSQATQISLEQAKQELKAGQYNQAEIHLRQIVQDQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PQSAEAYFNLGLSLHLQLELDEAIKTYEQAIQLDPTYDRPYTNMGLALIEANQLDEASTV
CCCCHHHEECCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH
FKQVLSLPERPEQPASIHTLAHYNLAIILKRQGKLDAAQQEVQAALAITPGFTQAQTLQQ
HHHHHCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
MLN
HHC
>Mature Secondary Structure
MQRSHANSVILFLLISSLWLIPGLGQSQATQISLEQAKQELKAGQYNQAEIHLRQIVQDQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PQSAEAYFNLGLSLHLQLELDEAIKTYEQAIQLDPTYDRPYTNMGLALIEANQLDEASTV
CCCCHHHEECCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH
FKQVLSLPERPEQPASIHTLAHYNLAIILKRQGKLDAAQQEVQAALAITPGFTQAQTLQQ
HHHHHCCCCCCCCCCCCHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
MLN
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA