| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334804
Identifier: 158334804
GI number: 158334804
Start: 1608013
End: 1608762
Strand: Reverse
Name: 158334804
Synonym: AM1_1641
Alternate gene names: NA
Gene position: 1608762-1608013 (Counterclockwise)
Preceding gene: 158334805
Following gene: 158334803
Centisome position: 24.74
GC content: 53.6
Gene sequence:
>750_bases ATGGGGTGGCCTAATCTGAGAAAGTGGCCTGCAGTGATGGGCTTAGGGCTCATAGGCCTTGTCGTCGCTGTTCTTGTGCA TTTCGGCTGGGTCCGTCCCAATCATGCGGCCCTCCAAGCTCCTGCGGCCCAGGTGCATCCGTTGCCAGCTGCTTTAGAAC GGTGGCAAGATCCCCAGGAACAAGGAGATTATTTTGATCAGATCAAAGTCACTCGCGTGGGGTATCTAGTCTGGAGCCAA TTTCCCGTCAGAGTCTATACTCAGCCTGCTCCAGCGTCTTTGCCATTAGTCCAAGAGAAATGGCCCCAGGCGGTTGATCA AGCGATTCAGGCTTGGCAAGCGTATTTTCCTCTGGAAGTGGTAACTGATCCGAACCAGGCTGATATCACTATCTCAGCGG TTGATCCCACTCAACGAAGTCAGGGACGTGTTCGCTCAGCAGAGACGCGCTTTAAGCTCTATGTAGATGACCAGCAGCGG TTGTCCCATCGCTGCACCATTCAAGTTCGAGCCAATCAAACAGAGACCTATATTGCTGCTGCGGTTCGCCACGAGTTAGG CCATGCCTTGGGGATTTGGGGTCATAGCCGCTTAAAAACCGATGCCCTCTATTTTTCCCAAGTGCGAACACCCGCTCCTA TTTCTGCACGGGATATGAATACCCTGAAACGGGTCTATCAGCAGCCAACTCGCCTGGGCTGGCCTGTGCAACAATCGTCA GACACTTCTGCGCCCCCTGCTGAACCTTAG
Upstream 100 bases:
>100_bases AAACCCTTAATCGCATCACTTGGACCCTCACCCTAATGTTTATGGGCTTAACCGTGGTTCTCAGCGCTGGCTGGCTCGGT TAACGGATGAGCTTAACACA
Downstream 100 bases:
>100_bases CGGGCTATACTCTCAGTGCGATGCTGGTCTGAGAAAACTGTGGATTTATATCAACAAGGGTTACAACCTCTTTTATTTTC GGCTTTGAAAGCTGACCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Zn-Dependent Protease
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MGWPNLRKWPAVMGLGLIGLVVAVLVHFGWVRPNHAALQAPAAQVHPLPAALERWQDPQEQGDYFDQIKVTRVGYLVWSQ FPVRVYTQPAPASLPLVQEKWPQAVDQAIQAWQAYFPLEVVTDPNQADITISAVDPTQRSQGRVRSAETRFKLYVDDQQR LSHRCTIQVRANQTETYIAAAVRHELGHALGIWGHSRLKTDALYFSQVRTPAPISARDMNTLKRVYQQPTRLGWPVQQSS DTSAPPAEP
Sequences:
>Translated_249_residues MGWPNLRKWPAVMGLGLIGLVVAVLVHFGWVRPNHAALQAPAAQVHPLPAALERWQDPQEQGDYFDQIKVTRVGYLVWSQ FPVRVYTQPAPASLPLVQEKWPQAVDQAIQAWQAYFPLEVVTDPNQADITISAVDPTQRSQGRVRSAETRFKLYVDDQQR LSHRCTIQVRANQTETYIAAAVRHELGHALGIWGHSRLKTDALYFSQVRTPAPISARDMNTLKRVYQQPTRLGWPVQQSS DTSAPPAEP >Mature_248_residues GWPNLRKWPAVMGLGLIGLVVAVLVHFGWVRPNHAALQAPAAQVHPLPAALERWQDPQEQGDYFDQIKVTRVGYLVWSQF PVRVYTQPAPASLPLVQEKWPQAVDQAIQAWQAYFPLEVVTDPNQADITISAVDPTQRSQGRVRSAETRFKLYVDDQQRL SHRCTIQVRANQTETYIAAAVRHELGHALGIWGHSRLKTDALYFSQVRTPAPISARDMNTLKRVYQQPTRLGWPVQQSSD TSAPPAEP
Specific function: Unknown
COG id: COG5549
COG function: function code O; Predicted Zn-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28040; Mature: 27909
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWPNLRKWPAVMGLGLIGLVVAVLVHFGWVRPNHAALQAPAAQVHPLPAALERWQDPQE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCHHHHHHCCCHHH QGDYFDQIKVTRVGYLVWSQFPVRVYTQPAPASLPLVQEKWPQAVDQAIQAWQAYFPLEV HCCHHHHHHHHHHHEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE VTDPNQADITISAVDPTQRSQGRVRSAETRFKLYVDDQQRLSHRCTIQVRANQTETYIAA EECCCCCCEEEEECCCCCHHCCCCCCCCCEEEEEECHHHHCCCEEEEEEECCCCHHHHHH AVRHELGHALGIWGHSRLKTDALYFSQVRTPAPISARDMNTLKRVYQQPTRLGWPVQQSS HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCC DTSAPPAEP CCCCCCCCC >Mature Secondary Structure GWPNLRKWPAVMGLGLIGLVVAVLVHFGWVRPNHAALQAPAAQVHPLPAALERWQDPQE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCCHHHHHHCCCHHH QGDYFDQIKVTRVGYLVWSQFPVRVYTQPAPASLPLVQEKWPQAVDQAIQAWQAYFPLEV HCCHHHHHHHHHHHEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE VTDPNQADITISAVDPTQRSQGRVRSAETRFKLYVDDQQRLSHRCTIQVRANQTETYIAA EECCCCCCEEEEECCCCCHHCCCCCCCCCEEEEEECHHHHCCCEEEEEEECCCCHHHHHH AVRHELGHALGIWGHSRLKTDALYFSQVRTPAPISARDMNTLKRVYQQPTRLGWPVQQSS HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCC DTSAPPAEP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA