BacMap

Definition	Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession	NC_009925
Length	6,503,724

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The map label for this gene is yxbG [H]

Identifier: 158334788

GI number: 158334788

Start: 1592781

End: 1593599

Strand: Direct

Name: yxbG [H]

Synonym: AM1_1623

Alternate gene names: 158334788

Gene position: 1592781-1593599 (Clockwise)

Preceding gene: 158334787

Following gene: 158334793

Centisome position: 24.49

GC content: 51.4

Gene sequence:

>819_bases
ATGACAAAAACGATTTTAATTACTGGTTCTACTGATGGTATCGGTTTAGAAACAGCCAAACTATTGGTTTCAGAAGGTCA
CAGAGTGCTGCTGCATGGACGCAATCCCACCAAGCTGGAGGCAGCCGCAAAATCCCTCTCCGATCTACCGGGTAGTGTTG
CCAGCTATGTTGCCGATTTGTCGCGGATGGCTGATGTGGGGTCACTGGCCCAGGCGGTGGCTAAAAACCACCCTACTTTG
GATGTCCTGATTAATAATGCAGGGGTCTTAAAAACACCTAATACAGTTACGCCGGACGGGCTGGATGTCCGCTTTGCGGT
AAATGCGATCGCCCCCTATCTACTCACCCAGCAACTCCGTCCTCTGATGACAGCATCAGGACGGATCATCAATGTATCCT
CCGCAGCTCAGTCCCCGGTGAATCTAGAAGCTTTGGCTGGACGAGTCCAGCTCACCGAAGACTTTACTGCCTATGCCCAA
AGTAAACTGGCCCTGACCATGTGGTCTCGCAGTTTGGCCCTTTCGCCTCTGGGGGATGGCCTCACCATAATCGCGGTTAA
TCCGGGTTCGATGCTGGGGAGCAAGATGGTAAAAGAGGGCTTTGGAGTAGCTGGGGGTGATCTGCGGATTGGCGCGGACA
TATTAACTCGCGCAGCCCTAACAGATGAATTTGCGGCTGCCTCAGGTCAATATTTTGACAACGATAAAGGTCAGTTTGCG
TCACCTCATCCCGATGCCCTCGATCCACAGAAATGCCAAAAAGTTGTAGAAGCGATTGAGACCTGTTTAGTAGACAGAGG
GTCGGACCTCTTTTGGTAA

Upstream 100 bases:

>100_bases
TTGCGATTTAACCAAGCAGATATCGAGACAACGCTAAAACGTCTAGCCGACGATATCTTGCCAGAATTTACGGTCTGCAG
TGATTAAGGAAGCCAAAACC

Downstream 100 bases:

>100_bases
ACCATAAATAACTGTAAAAGAATAATTGAAGAAGATTCTAGCTTTTATACGACGCGAATAATCCGATAGTAGAGGATATA
ACCAGAAAATCTGATTTCAT

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTKTILITGSTDGIGLETAKLLVSEGHRVLLHGRNPTKLEAAAKSLSDLPGSVASYVADLSRMADVGSLAQAVAKNHPTL
DVLINNAGVLKTPNTVTPDGLDVRFAVNAIAPYLLTQQLRPLMTASGRIINVSSAAQSPVNLEALAGRVQLTEDFTAYAQ
SKLALTMWSRSLALSPLGDGLTIIAVNPGSMLGSKMVKEGFGVAGGDLRIGADILTRAALTDEFAAASGQYFDNDKGQFA
SPHPDALDPQKCQKVVEAIETCLVDRGSDLFW

Sequences:

>Translated_272_residues
MTKTILITGSTDGIGLETAKLLVSEGHRVLLHGRNPTKLEAAAKSLSDLPGSVASYVADLSRMADVGSLAQAVAKNHPTL
DVLINNAGVLKTPNTVTPDGLDVRFAVNAIAPYLLTQQLRPLMTASGRIINVSSAAQSPVNLEALAGRVQLTEDFTAYAQ
SKLALTMWSRSLALSPLGDGLTIIAVNPGSMLGSKMVKEGFGVAGGDLRIGADILTRAALTDEFAAASGQYFDNDKGQFA
SPHPDALDPQKCQKVVEAIETCLVDRGSDLFW
>Mature_271_residues
TKTILITGSTDGIGLETAKLLVSEGHRVLLHGRNPTKLEAAAKSLSDLPGSVASYVADLSRMADVGSLAQAVAKNHPTLD
VLINNAGVLKTPNTVTPDGLDVRFAVNAIAPYLLTQQLRPLMTASGRIINVSSAAQSPVNLEALAGRVQLTEDFTAYAQS
KLALTMWSRSLALSPLGDGLTIIAVNPGSMLGSKMVKEGFGVAGGDLRIGADILTRAALTDEFAAASGQYFDNDKGQFAS
PHPDALDPQKCQKVVEAIETCLVDRGSDLFW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI225579078, Length=273, Percent_Identity=31.1355311355311, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI186928839, Length=255, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI166795268, Length=247, Percent_Identity=32.3886639676113, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI19923931, Length=238, Percent_Identity=30.2521008403361, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI7706523, Length=265, Percent_Identity=30.9433962264151, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI10190746, Length=290, Percent_Identity=30.3448275862069, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI193804850, Length=257, Percent_Identity=30.3501945525292, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI146231950, Length=250, Percent_Identity=32, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1787526, Length=193, Percent_Identity=31.0880829015544, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786701, Length=200, Percent_Identity=32, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082100, Length=191, Percent_Identity=28.2722513089005, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17532791, Length=257, Percent_Identity=26.0700389105058, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17532805, Length=215, Percent_Identity=30.6976744186047, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17565030, Length=194, Percent_Identity=33.5051546391753, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17505416, Length=221, Percent_Identity=29.8642533936652, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=195, Percent_Identity=32.8205128205128, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=215, Percent_Identity=33.4883720930233, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17558006, Length=283, Percent_Identity=29.3286219081272, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=214, Percent_Identity=32.2429906542056, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=200, Percent_Identity=30, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193207620, Length=211, Percent_Identity=27.9620853080569, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=210, Percent_Identity=31.4285714285714, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI32565532, Length=217, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=195, Percent_Identity=31.7948717948718, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=198, Percent_Identity=31.3131313131313, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=197, Percent_Identity=28.9340101522843, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=214, Percent_Identity=28.9719626168224, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=199, Percent_Identity=31.6582914572864, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=214, Percent_Identity=30.3738317757009, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115533174, Length=115, Percent_Identity=39.1304347826087, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533172, Length=115, Percent_Identity=39.1304347826087, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71992402, Length=262, Percent_Identity=29.0076335877863, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=214, Percent_Identity=31.3084112149533, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=212, Percent_Identity=29.2452830188679, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=197, Percent_Identity=29.4416243654822, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=216, Percent_Identity=31.0185185185185, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=197, Percent_Identity=29.9492385786802, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=191, Percent_Identity=29.8429319371728, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324820, Length=227, Percent_Identity=28.1938325991189, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI20129347, Length=252, Percent_Identity=29.7619047619048, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI22024069, Length=254, Percent_Identity=32.6771653543307, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI45554248, Length=193, Percent_Identity=34.1968911917098, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24640117, Length=193, Percent_Identity=34.1968911917098, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24586328, Length=260, Percent_Identity=31.1538461538462, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI161076371, Length=258, Percent_Identity=31.0077519379845, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24656154, Length=274, Percent_Identity=28.4671532846715, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI19922628, Length=274, Percent_Identity=28.4671532846715, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI19921754, Length=200, Percent_Identity=32.5, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24647946, Length=275, Percent_Identity=30.1818181818182, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI45553409, Length=275, Percent_Identity=30.1818181818182, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24647948, Length=275, Percent_Identity=30.1818181818182, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28573296, Length=253, Percent_Identity=27.6679841897233, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI23397609, Length=190, Percent_Identity=32.6315789473684, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21357041, Length=195, Percent_Identity=32.3076923076923, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24644339, Length=192, Percent_Identity=32.8125, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571526, Length=194, Percent_Identity=31.4432989690722, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=31.9672131147541, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24647931, Length=229, Percent_Identity=29.2576419213974, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28570; Mature: 28439

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTILITGSTDGIGLETAKLLVSEGHRVLLHGRNPTKLEAAAKSLSDLPGSVASYVADL
CCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
SRMADVGSLAQAVAKNHPTLDVLINNAGVLKTPNTVTPDGLDVRFAVNAIAPYLLTQQLR
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHH
PLMTASGRIINVSSAAQSPVNLEALAGRVQLTEDFTAYAQSKLALTMWSRSLALSPLGDG
HHHHCCCCEEEECCCCCCCCCHHHHHCEEEEHHHHHHHHHHHHHEEEHHHHHCCCCCCCC
LTIIAVNPGSMLGSKMVKEGFGVAGGDLRIGADILTRAALTDEFAAASGQYFDNDKGQFA
EEEEEECCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SPHPDALDPQKCQKVVEAIETCLVDRGSDLFW
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKTILITGSTDGIGLETAKLLVSEGHRVLLHGRNPTKLEAAAKSLSDLPGSVASYVADL
CEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
SRMADVGSLAQAVAKNHPTLDVLINNAGVLKTPNTVTPDGLDVRFAVNAIAPYLLTQQLR
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHH
PLMTASGRIINVSSAAQSPVNLEALAGRVQLTEDFTAYAQSKLALTMWSRSLALSPLGDG
HHHHCCCCEEEECCCCCCCCCHHHHHCEEEEHHHHHHHHHHHHHEEEHHHHHCCCCCCCC
LTIIAVNPGSMLGSKMVKEGFGVAGGDLRIGADILTRAALTDEFAAASGQYFDNDKGQFA
EEEEEECCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SPHPDALDPQKCQKVVEAIETCLVDRGSDLFW
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]