BacMap

Definition	Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession	NC_009925
Length	6,503,724

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The map label for this gene is macB [H]

Identifier: 158334758

GI number: 158334758

Start: 1572281

End: 1572640

Strand: Reverse

Name: macB [H]

Synonym: AM1_1592

Alternate gene names: 158334758

Gene position: 1572640-1572281 (Counterclockwise)

Preceding gene: 158334767

Following gene: 158334755

Centisome position: 24.18

GC content: 50.0

Gene sequence:

>360_bases
TTGAAGAGCAGCCAAAGTCGTGTAGCGAGACAAGACTCCCTAAAACTGCTGAAACAAGTTGGGCTCGCCAATAAATGTTG
GAGTTCCCACCGCAATCTATCGGGTGGGCAGCAACAGCGAGTTGAGATCGCAAGAGCGTTAGCCAGAAATCCCAAGCTGA
TTCTGGCAGATGAACCCACGGCCGCTCTGGACTCTCAGCGGGACCTTACGATTATGGAACCGCTGCCTAAATTAGCAAAG
GAAGAAGGCTGCACGGTTCTAATGGTGACTCATGACGATATCGCCGATCGGGTGGTCTATGTAGAAGATGGACTAATTAC
ACCGAAACCTGCCAATCCTTCTTTTGTCCATGAACCTTAG

Upstream 100 bases:

>100_bases
CTAGGTCTTTTGATAGCAAGCACCAATACTTGGCTCACTAGCCCATGTGGGAAGGACTTTTCAGCCTTAGTGATAAAAAT
GGGTTTATCAATCAACCCAT

Downstream 100 bases:

>100_bases
TGATGGATCTGGTCTTCGTTGGGTGAGCCAATATACAAATAACGGTTGGGACTTCAGCCGTGGCAAGCGTCTTCAAGCTA
ATACCAGAGTGTTGAAGCCA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKSSQSRVARQDSLKLLKQVGLANKCWSSHRNLSGGQQQRVEIARALARNPKLILADEPTAALDSQRDLTIMEPLPKLAK
EEGCTVLMVTHDDIADRVVYVEDGLITPKPANPSFVHEP

Sequences:

>Translated_119_residues
MKSSQSRVARQDSLKLLKQVGLANKCWSSHRNLSGGQQQRVEIARALARNPKLILADEPTAALDSQRDLTIMEPLPKLAK
EEGCTVLMVTHDDIADRVVYVEDGLITPKPANPSFVHEP
>Mature_119_residues
MKSSQSRVARQDSLKLLKQVGLANKCWSSHRNLSGGQQQRVEIARALARNPKLILADEPTAALDSQRDLTIMEPLPKLAK
EEGCTVLMVTHDDIADRVVYVEDGLITPKPANPSFVHEP

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI255708477, Length=88, Percent_Identity=40.9090909090909, Blast_Score=67, Evalue=4e-12,
Organism=Homo sapiens, GI148612844, Length=84, Percent_Identity=42.8571428571429, Blast_Score=66, Evalue=6e-12,
Organism=Homo sapiens, GI9961250, Length=81, Percent_Identity=43.2098765432099, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI4505771, Length=81, Percent_Identity=43.2098765432099, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI9961252, Length=81, Percent_Identity=43.2098765432099, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI42741659, Length=90, Percent_Identity=40, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI171184400, Length=91, Percent_Identity=39.5604395604396, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788225, Length=110, Percent_Identity=44.5454545454545, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1786872, Length=116, Percent_Identity=40.5172413793103, Blast_Score=83, Evalue=4e-18,
Organism=Escherichia coli, GI1787029, Length=117, Percent_Identity=41.8803418803419, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1786398, Length=109, Percent_Identity=44.0366972477064, Blast_Score=79, Evalue=6e-17,
Organism=Escherichia coli, GI1787105, Length=100, Percent_Identity=46, Blast_Score=78, Evalue=2e-16,
Organism=Escherichia coli, GI87081834, Length=101, Percent_Identity=42.5742574257426, Blast_Score=76, Evalue=6e-16,
Organism=Escherichia coli, GI1787164, Length=92, Percent_Identity=46.7391304347826, Blast_Score=76, Evalue=7e-16,
Organism=Escherichia coli, GI1788644, Length=117, Percent_Identity=37.6068376068376, Blast_Score=74, Evalue=3e-15,
Organism=Escherichia coli, GI1789672, Length=112, Percent_Identity=37.5, Blast_Score=72, Evalue=8e-15,
Organism=Escherichia coli, GI1786703, Length=92, Percent_Identity=41.304347826087, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI1790544, Length=114, Percent_Identity=36.8421052631579, Blast_Score=70, Evalue=4e-14,
Organism=Escherichia coli, GI1786563, Length=78, Percent_Identity=50, Blast_Score=69, Evalue=9e-14,
Organism=Escherichia coli, GI1788761, Length=110, Percent_Identity=41.8181818181818, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1789032, Length=100, Percent_Identity=39, Blast_Score=67, Evalue=2e-13,
Organism=Escherichia coli, GI1787089, Length=93, Percent_Identity=46.2365591397849, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1789963, Length=118, Percent_Identity=35.5932203389831, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI1787370, Length=111, Percent_Identity=36.036036036036, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI145693107, Length=78, Percent_Identity=44.8717948717949, Blast_Score=64, Evalue=3e-12,
Organism=Escherichia coli, GI1787759, Length=121, Percent_Identity=33.0578512396694, Blast_Score=63, Evalue=5e-12,
Organism=Escherichia coli, GI1787112, Length=87, Percent_Identity=43.6781609195402, Blast_Score=62, Evalue=8e-12,
Organism=Escherichia coli, GI1787712, Length=79, Percent_Identity=44.3037974683544, Blast_Score=62, Evalue=9e-12,
Organism=Escherichia coli, GI1789873, Length=79, Percent_Identity=46.8354430379747, Blast_Score=62, Evalue=9e-12,
Organism=Escherichia coli, GI1789962, Length=116, Percent_Identity=30.1724137931034, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1788506, Length=104, Percent_Identity=37.5, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1787143, Length=81, Percent_Identity=41.9753086419753, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI48994883, Length=104, Percent_Identity=38.4615384615385, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1788165, Length=83, Percent_Identity=38.5542168674699, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=114, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1788450, Length=105, Percent_Identity=34.2857142857143, Blast_Score=60, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=91, Percent_Identity=40.6593406593407, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=90, Percent_Identity=40, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=78, Percent_Identity=46.1538461538462, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115534520, Length=78, Percent_Identity=47.4358974358974, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=76, Percent_Identity=44.7368421052632, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=88, Percent_Identity=38.6363636363636, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=90, Percent_Identity=37.7777777777778, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=100, Percent_Identity=34, Blast_Score=64, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17136662, Length=76, Percent_Identity=44.7368421052632, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 13154; Mature: 13154

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSQSRVARQDSLKLLKQVGLANKCWSSHRNLSGGQQQRVEIARALARNPKLILADEPT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
AALDSQRDLTIMEPLPKLAKEEGCTVLMVTHDDIADRVVYVEDGLITPKPANPSFVHEP
HHCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEECCCCCCCCCCCCC
>Mature Secondary Structure
MKSSQSRVARQDSLKLLKQVGLANKCWSSHRNLSGGQQQRVEIARALARNPKLILADEPT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
AALDSQRDLTIMEPLPKLAKEEGCTVLMVTHDDIADRVVYVEDGLITPKPANPSFVHEP
HHCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA