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The map label for this gene is ybjZ [C]

Identifier: 158334755

GI number: 158334755

Start: 1571189

End: 1571479

Strand: Reverse

Name: ybjZ [C]

Synonym: AM1_1589

Alternate gene names: 158334755

Gene position: 1571479-1571189 (Counterclockwise)

Preceding gene: 158334758

Following gene: 158334754

Centisome position: 24.16

GC content: 50.86

Gene sequence:

>291_bases
TTGGGATTACCATTTCCATTTTATCTTGGAGAGTTTGGCATTAAAGGCGCAAGAGCGTTAGCCGGAAGCCCCAAGTTGAT
TCTGGCAGACGAACCCACGGCTGCCCTGGACTCTCAGCGGGGTCACACCATAATGGAACTGCTGCGAAAATTAGCCAAGG
AAGAAGGCTGCACGGTCCTCATGGTCACCCATGACCCCCGGATTATGGATATCGCCGATCGGGTGGTCTATGAAGAAGAT
GGACTGATCACACCGAAACCTACCAACCCTTCTTTTGTCTATGAGCCTTAA

Upstream 100 bases:

>100_bases
CTTGCTGCCGAATGCCAGCCTCGTAGAGTTCTTGCCCACGTCTGGCTAACTCTTCTTTACTGTGGCGTCGTTGGCGAACG
GCCATGAGTCTAACCTCACT

Downstream 100 bases:

>100_bases
GTGATGGCTTTTGTCTTCGTTGGGTGAAGCCAATATGAAAGACCCATTTTTTCGGCGTCAGTCGTCGAATGGGTATGGAC
GATTCTGTATGCTTTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MGLPFPFYLGEFGIKGARALAGSPKLILADEPTAALDSQRGHTIMELLRKLAKEEGCTVLMVTHDPRIMDIADRVVYEED
GLITPKPTNPSFVYEP

Sequences:

>Translated_96_residues
MGLPFPFYLGEFGIKGARALAGSPKLILADEPTAALDSQRGHTIMELLRKLAKEEGCTVLMVTHDPRIMDIADRVVYEED
GLITPKPTNPSFVYEP
>Mature_95_residues
GLPFPFYLGEFGIKGARALAGSPKLILADEPTAALDSQRGHTIMELLRKLAKEEGCTVLMVTHDPRIMDIADRVVYEEDG
LITPKPTNPSFVYEP

Specific function: Unknown

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=71, Percent_Identity=47.887323943662, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 10572; Mature: 10441

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPFPFYLGEFGIKGARALAGSPKLILADEPTAALDSQRGHTIMELLRKLAKEEGCTVL
CCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
MVTHDPRIMDIADRVVYEEDGLITPKPTNPSFVYEP
EEECCCCEEHHHHHEEECCCCEECCCCCCCCEEECC
>Mature Secondary Structure 
GLPFPFYLGEFGIKGARALAGSPKLILADEPTAALDSQRGHTIMELLRKLAKEEGCTVL
CCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
MVTHDPRIMDIADRVVYEEDGLITPKPTNPSFVYEP
EEECCCCEEHHHHHEEECCCCEECCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087; 11402022; 12150914 [H]